SlideShare a Scribd company logo
1 of 84
In-House Microbial
Isolates in Compendial
Testing
Regulatory Requirements
1
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
2
Agenda
 Current Industry Debate Over the Use of In-
House Isolates in Compendial Testing
 Disinfectant Efficacy Testing
 Media Growth Promotion Testing
 Test Method Suitability/Qualification
 Rapid Microbiological Methods
 Selection of In-House Isolates for Use in
Compendial Testing
3
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Current Industry Debate Over the Use
of In-House Isolates in Compendial
Testing
4
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
"Good practice includes the periodic
challenge of prepared media with low levels
of organisms. This includes USP indicator
organisms as well as normal flora."
U.S. Food and Drug Administration: “Guide to Inspections of Microbiological
Pharmaceutical Quality Control Laboratories” (1993)
5
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
PMF List (2010)
 “As soon as an environmental isolate is put onto growth media, it
is no longer an ‘environmental’ isolate’.”
 “EM [environmental monitoring] organisms will stop to behave as
such after a few transfers.”
 “Environmental isolates are often mismanaged by the
microbiology lab.”
 “Many companies simply don't have the qualified equipment and
personnel to preserve and maintain stock cultures of their
environmental bugs.”
 “This is one of the problems with using 483 observations as
‘cGMP’. They are not. They are the observations of one inspector
who may or may not be knowledgeable in microbiology.”
6
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
The arguments against the inclusion of in-house
isolates fall into three categories:
1. An “environmental” isolate, once cultured in the
Microbiology laboratory, loses its “wild-type” traits.
2. Preparing an in-house microbial isolate to create the
organism concentration necessary for compendial
testing is too problematic to be practical.
3. The regulatory expectation that in-house microbial
isolates be included in compendial testing is
represented by only a few “rogue” FDA inspectors,
and is not an Agency-wide expectation.
7
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Does an “environmental” isolate lose its “wild-type” traits
after being cultured?
 There has been no published empirical evidence that an
in-house microbial isolate either does or does not lose its
“wild-type” traits upon culturing.
 United States Pharmacopeia (USP <61>): “Seed-lot
culture maintenance techniques (seed-lot systems) are
used so that the viable microorganisms used for
inoculation are not more than five passages removed
from the original master seed-lot”.
 Although in most cases an in-house isolate likely
becomes physiologically more “robust” upon culturing, it
is reasonable to assume that a limited number of
passages from the source culture allows the
microorganism to retain its “wild-type” genetic traits.
8
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
“It’s too difficult to be practical” does not address the scientific
merit of including in-house isolates in compendial testing.
 The basic process includes preparation of a suspension of
unknown concentration, performing serial dilutions and plate
counts to determine the concentration, and then standardizing
the suspension to the desired concentration.
 During the incubation period for serial dilution plates, the
suspension is typically held under refrigerated conditions for
several days.
 During this time, the concentration of the organism in suspension
may change, resulting in either a decrease or increase.
 Standardization and final use of this suspension may therefore
result in a “miss” in terms of its assumed concentration,
discovered only after testing is complete.
9
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
10
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Are 483 observations and Warning Letters
limited to just a few inspectors?
 “Compliance versus science”
 The increasing trend in citing firms for not
meeting this requirement demonstrates that
the Agency’s SMEs recognize the scientific
merit of including in-house isolates in
compendial testing.
 Defending against this expectation is a
challenge!
11
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Disinfectant Efficacy Testing
Methodology
12
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Point of clarification …
 “Disinfectant”: A chemical agent used on
inanimate objects (e.g., floors, walls, sinks)
to destroy virtually all recognized pathogenic
microorganisms, but not necessarily all
microbial forms (e.g., bacterial endospores).
[Centers for Disease Control and Prevention]
 “Sanitizer”: A chemical agent that
simultaneously cleans and disinfects.
13
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 1: Determine the test method
◦ Tube method: Inoculate dilutions of the
disinfectant and determine the microbial
reduction. Typically referred to as “use-
dilution” testing.
◦ Coupon method: Inoculate the surfaces of
coupons representing facility materials of
construction. Expose them to disinfectant.
Remove the inoculum. Determine log
reduction. "Six Steps to Qualifying Disinfectants“, Deborah
Ensign, Microtest Laboratories, Inc., 2011
14
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 2: Determine the Challenge
Organisms
◦ American Type Culture Collection (ATCC)
organisms (gram-negative, gram-positive,
spore-former, fungi)
◦ Environmental isolates
15
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 3: Determine the Surface Types to
be Tested
◦ Examples: stainless steel, glass, plastic, tile,
plexiglas
◦ 2” x 2” coupons
◦ Sterilize or disinfect before using.
16
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 4: Determine Expiration of
Disinfectants
◦ Use the same concentration and contact
exposure time used in the facility.
◦ Use the worst-case expiration date for each
disinfectant.
17
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 5: Method Validation
◦ Critical!
◦ Typically called the “recovery” part of the test
◦ Must demonstrate adequate recovery of the
challenge organisms in the presence of the
disinfectants.
◦ Inoculate the test system (i.e., the medium
exposed to disinfectant) with a low-level challenge
of test organism. Include a control that has not
been exposed.
◦ Recovery: 50-200% of control
18
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Step 6: Efficacy Testing
◦ USP <1072>, “Disinfectants and Antiseptics”
◦ Typically called the “challenge” part of the test.
◦ Inoculate tube/coupon.
◦ Expose to the desired concentration of the
disinfectant for the desired contact time.
◦ Demonstrate 2-log reduction for spore-formers.
◦ Demonstrate 3-log reduction for vegetative
bacteria.
19
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
20
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Disinfectant Efficacy Testing
Compliance Deficiencies
21
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Disinfectant effectiveness studies
against representative microorganisms
and/or specific in-house isolates were not
conducted for cleaning agents used in
your facility to disinfect production areas,
including aseptic areas.” [FDA Warning
Letter, March 28, 2008]
 “No rationale was provided for the ATCC
[American Type Culture Collection]
organisms used nor was [sic] actual EM
isolates used for the study.” [FDA
Memorandum, Biologics License
Application, 2009]
22
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “The firm was unable to provide scientific rationale for
the use of the selected organisms used in the
Disinfectant Efficacy study. These organisms were not
representative of organisms isolated from the facility
nor were they representative of the USP guidelines.”
[FDA 483 Observation, May 25, 2011]
 “Your response states that a supplemental
disinfectant efficacy study, using mold spores of in
house isolates on various surfaces, will be performed
and completed by [redacted]. We suggest that this
proposed study be conducted as soon as possible.”
[FDA Warning Letter, July 12, 2012]
23
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Disinfectant Efficacy Testing
Industry Guides
24
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Routinely used disinfectants should be effective against the
normal microbial vegetative flora recovered from the facility... If
indicated, microorganisms associated with adverse trends can be
investigated as to their sensitivity to the disinfectants employed
in the cleanroom in which the organisms were isolated.” [FDA
Guidance for Industry: Sterile Drug Products Produced by Aseptic
Processing - Current Good Manufacturing Practice, September
2004]
 “If using an Association of Official Analytical Chemists (AOAC)
method, microorganisms specified in the reference which are
most likely to be found in the manufacturing environment should
be used and tests performed on microbial isolates frequently
found in the environment can provide additional information on
the effectiveness of disinfectants.” [“Regulatory Aspects
Concerning the Quality Controls of Microbiological and Nonviable
Particulate Contamination in Pharmaceutical Manufacturing”, Oji,
(FDA), American Pharmaceutical Review, January/February 2004]
25
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
United States Pharmacopeia, <1072> “Disinfectant and Antiseptics”
 “… the most frequently isolated microorganisms from an environmental
monitoring program may be periodically subjected to use-dilution testing with
the agents used in the disinfection program to confirm their susceptibility, as
there are real differences among different species in resistance to the lethal
effects of different sanitizers.”
 “To demonstrate the efficacy of a disinfectant within a pharmaceutical
manufacturing environment, it may be deemed necessary to conduct the
following tests: (1) use-dilution tests (screening disinfectants for their efficacy
at various concentrations and contact times against a wide range of standard
test organisms and environmental isolates); (2) surface challenge tests (using
standard test microorganisms and microorganisms that are typical
environmental isolates, applying disinfectants to surfaces at the selected use
concentration with a specified contact time, and determining the log reduction
of the challenge microorganisms); and (3) a statistical comparison of the
frequency of isolation and numbers of microorganisms isolated prior to and
after the implementation of a new disinfectant.”
26
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “It is a sound practice to perform challenge
testing of the selected sanitizers/disinfectants
with isolates routinely recovered by the
environmental monitoring program. This
establishes the practical effectiveness of the
disinfectants.” [Parenteral Drug Association
Technical Report No. 13, “Fundamentals of an
Environmental Monitoring Program”,
September/October 2001]
 “Regulatory authorities now expect evidence
of the efficacy of disinfection agents against
environmental isolates.” [ASTM E2614 – 08,
Standard Guide for Evaluation of Cleanroom
Disinfectants]
27
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Disinfectant Efficacy Testing
Industry Literature
28
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Validation of sanitising agents for effectiveness against
isolated organisms found in cleanroom environments is
increasingly becoming an area of concern to both
manufacturers and regulatory agencies.” [“Surface
Disinfectant Validations”, Nelson Laboratories, Inc., 2004]
 “It is generally recommended to use fungal spore
suspensions of both reference cultures and environmental
isolates... Regulatory authorities also expect to see the
specific environmental isolates most frequently found in
the facility included in the disinfectant effectiveness
testing.” [“Control Strategies for Fungal Contamination in
Cleanrooms”, Lopolito et al., Controlled Environments
Magazine, September 2007]
29
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “… users are expected to challenge disinfectants not only
with standard test organisms but also with facility
environmental isolates because commercially available
microorganisms behave quite differently from their ‘wild’
counterparts. Selection of the test organisms is crucial and
an important issue to the regulatory agencies, especially
when it comes to environmental isolates.” [“Microbial Limit
and Bioburden Tests: Validation Approaches and Global
Requirements”, Clontz, October 14, 2008]
 “...it is crucial to make an educated investment in
antimicrobial products that are effective against your
specific mold isolates.” [“Evaluating the Activity of
Disinfectants Against Fungi”, Polarine et al., CleanRooms,
Volume 23, No. 2, February 2009]
30
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “…scientifically-based references and
conventional wisdom used to select these
products does not alleviate drug manufacturers
of the requirement to validate disinfectants,
sporicides, and even isopropyl alcohol for use
in facilities under actual use conditions against
environmental isolates.” [“Prevention of
Microbial Contamination“, Kopis Sartain and
Polarine, Pharmaceutical Technology, June 2,
2011
 “Disinfectant Efficacy Studies should be
considered as a fundamental requirement
during the development of qualifications of
disinfectants on various surfaces with both
ATCC and in-house isolates.” [Friedman, Blog,
August 15, 2011]
31
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Disinfectant testing involves challenging the disinfectant solution
(as a suspension test) and challenging different surface materials
with disinfectant and a range of different microorganisms
including isolates from the facility.” [ “Cleanroom Cleaning and
Disinfection: Eight Steps for Success”, Sandle, Controlled
Environments Magazine, March 2012]
 “This study clearly demonstrates that the most frequently isolated
microorganisms from an environmental monitoring program may
be periodically subjected to microbroth dilution testing with
cleanroom disinfectant agents used in the disinfection program to
confirm their sensitivity profile.” [“In vitro Antifungal Efficacy of
Biguanides and Quaternary Ammonium Compounds against
Cleanroom Fungal Isolates”, Vijayakumar et al., PDA Journal of
Pharmaceutical Science and Technology, May/June 2012]
32
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Media Growth Promotion Testing
Methodology
33
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 USP <61>, “Microbiological Examination
of Nonsterile Products: Microbial
Enumeration Tests”
 USP <62>, “Microbiological Examination
of Nonsterile Products: Tests for Specified
Organisms”
 USP <71>, “Sterility Tests”
34
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Challenge the medium with a low-level
inoculum of test organism: <100 cfu
 Control = Previously qualified medium
 ATCC organisms
 In-house isolates
 Agar: 50-200% recovery
 Broth: Turbidity
35
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Media Growth Promotion Testing
Compliance Deficiencies
36
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Not limited to aseptic manufacturers!
Manufacturers of non-sterile products
have been subject to regulatory
enforcement.
37
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “… the growth promotion tests for media
used during environmental monitoring did
not include the use of the normal microbial
flora commonly recovered and isolated from
the various production and support areas.”
[FDA Warning Letter, February 24, 1997]
 “Growth promotion qualification of the media
used for environmental monitoring does not
include a challenge with mold isolates.” [FDA
Warning Letter, July 10, 1998]
38
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Growth promotion testing performed on media
fill vials does not include evidence the media is
capable of detecting environmental isolates
found in class 100 filling areas. For example,
mold organisms are not used to challenge media,
even though mold isolates have been identified
in filling room 1.” [FDA Warning Letter, January
11, 2001]
 “… your firm does not perform challenge testing
to the sterility media with environmental isolates
from the environmental monitoring program.”
[FDA Warning Letter, October 29, 2010]
39
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Growth promotion studies were deficient because
there was “no inclusion of environmental isolates
in the growth promotions that are conducted,
including growth promotion studies for aseptic
media simulations.” [FDA 483 Observation, May
2008]
 “… the firm does not test TSA … during growth
promotion tests for microorganisms to include for
example, molds, yeasts and other potential
known environmental contaminants found in the
manufacturing facility and/or raw materials.”
[FDA 483 Observation, April 30, 2010]
40
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 The FDA expressed its satisfaction that
the firm complied with its expectation:
“Growth promotion studies were
conducted successfully using indicator
microorganisms per USP as well as local
isolates.” [FDA Memorandum, BLA
Recommendation, January 16, 2009]
41
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Media Growth Promotion Testing
Industry Guides
42
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “The QC laboratory should determine if USP indicator
organisms sufficiently represent production-related
isolates. Environmental monitoring and sterility test
isolates can be substituted (as appropriate) or added
to the growth promotion challenge.” [FDA Guidance
for Industry: Sterile Drug Products Produced by
Aseptic Processing - Current Good Manufacturing
Practice, September 2004]
 “… for the Growth Promotion test, representative
microflora isolated from the controlled environment or
ATCC strain preparations of these isolates may also
be used to test media.” [USP <1116>,
“Microbiological Evaluation of Clean Rooms and Other
Controlled Environments”]
43
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “… microorganisms used in growth-
promotion testing may be based on
the manufacturer's recommendation
for a particular medium, or may
include representative environmental
isolates.” [USP <1117>,
“Microbiological Best Laboratory
Practices”]
 USP clarifies parenthetically that
“these latter are not to be construed
as compendial requirements.”
44
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
From PDA Technical Report No. 22, “Process Simulation
for Aseptically Filled Products” (2011):
 “The growth promotion properties of the incubation
media should be evaluated using pharmacopeial
methods. The inclusions of tests for environmental
organisms or those isolated from sterility test
positives are recommended.”
 “Growth promotion testing ... is performed using
pharmacopeial methods. Consideration should be
given to testing with other microorganisms found in
the aseptic processing area environment, such as
those isolated during environmental and personnel
monitoring and sterility test contaminants.”
45
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
From the Pharmaceutical Inspection
Convention/Pharmaceutical Inspection Cooperation
Scheme (PIC/S):
 “The medium selected should be capable of
supporting a wide range of microorganisms, which
might reasonably be encountered and be based also
on the in house flora (e.g. isolates from monitoring
etc.).” [Recommendation on the Validation of Aseptic
Processes. PI-007-6, 1 January 2011]
 “Environmental or fastidious organisms may be used
if alternative non-selective enrichment media have
been selected for the sterility test.” [Recommendation
on Sterility Testing. PI-012-3, 25 September 2007]
46
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Media Growth Promotion Testing
Industry Literature
47
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Growth promotion should be demonstrated using
organisms listed in USP General Chapter <71> as well as
environmental, personnel, and sterility test failure isolates
[at the] <100-cfu [colony-forming unit] challenge.”
[“Microbial Testing in Support of Aseptic Processing”,
Cundell, Pharmaceutical Technology, June 2004]
 “In general, a microbial growth medium such as soybean
casein digest medium should be used. This media selected
should be demonstrated to promote growth of United
States Pharmacopoeia (USP) <71> indicated organisms as
well as representative isolates identified from
environmental monitoring, personal monitoring, and
positive sterility test results.” [Environmental Monitoring for
Cleanrooms and Controlled Environments, Dixon (Ed.),
November 2, 2006.]
48
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “In addition to the compendial organisms required in the [media
growth promotion] tests, addition of specific microorganisms of
interest could be useful if they have been recovered from past
tests (e.g., a Sterility Test contaminant or a frequent
environmental monitoring isolate).” [“Quality Control of
Microbiological Culture Media”, Sutton, PMF Newsletter, January
2006]
 “The media must be challenged with the organisms listed in the
current version of the compendia as well as one or more in-house
isolates… The in-house cultures used must be qualified as well,
with regards to identity and population size. The challenge should
be with <100 CFU and the population size must be verified and
recorded.” [“Introduction to Sterility Testing: Control of the
Environment, Test Limitations, and Investigating Manufacturing
Systems”, Mentel, American Pharmaceutical Review, Jan/Feb
2006]
49
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “In addition to type cultures, environmental
isolates are commonly used in media
testing regimes. These organisms are
designed to demonstrate that a particular
lot of culture media will grow
microorganisms which are representative of
the types that are found in the
manufacturing environment... The use of
such isolates is increasingly becoming a
regulatory expectation.” [“Assessment of
Culture Media in Pharmaceutical
Microbiology”, Sandle, Pharmaceutical
Microbiology Blog, April 3, 2012]
50
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Test Method Suitability/Qualification
Compliance Deficiencies
Industry Guides
51
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 There has been no documented evidence that
the FDA has cited a manufacturer for lack of
inclusion of in-house isolates in microbiological
test method suitability/qualification.
 “The test organisms selected should reflect
organisms that could be found in the product,
process, or manufacturing environment.” [FDA
Final Rule on “Amendments to Sterility Test
Requirements for Biological Products”, June 4,
2012]
 Recent Rule… more regulatory scrutiny in the
near future!
52
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Test Method Suitability/Qualification
Industry Literature
53
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “There is a strong argument that environmental isolates
are the best challenge to media and for validation studies
like sterility test validation. They are the most sensitive
micro-organisms, having been exposed recently to
disinfectants, particular soils etc.” [“The Use of
Environmental Isolates”, Sandle, Pharmaceutical
Microbiology Blog, January 10, 2010]
 “The author highly suggests performing test method
suitability studies using wild-type isolates from production
surfaces instead of laboratory-adapted strains of bacteria.
Wild-type strains are a better representation of the
organisms encountered on production areas than those
strains that lack wild characteristics.” [“Bioburden Method
Suitability for Cleaning and Sanitation Monitoring: How Far
Do We Have to Go?”, Salaman-Byron, Pharmaceutical
Technology, August 2, 2010]
54
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Rapid Microbiological Methods
Compliance Deficiencies
Industry Guides
55
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Rapid microbiological methods (RMMs)
have become a growing area of
advancement over the past several years.
 There has been no documented evidence
that the FDA has cited a manufacturer for
lack of inclusion of in-house isolates in
rapid microbiological methods.
56
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “You should develop a panel of microorganisms
relevant to the product and process to challenge
the performance of your RMM. We recommend
that you include in your panel microorganisms
which represent the following categories: …
◦ isolates detected in starting materials,
◦ isolates detected by in-process testing or during
preliminary product testing,
◦ isolates detected by environmental monitoring of your
manufacturing facility,
◦ isolates from your production areas which represent low
nutrient and high stress environments …”
FDA Guidance for Industry: Validation of Growth-Based Rapid
Microbiological Methods for Sterility Testing of Cellular and
Gene Therapy Products (Draft), February 2008
57
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Rapid Microbiological Methods
Industry Literature
58
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “To demonstrate the [RMM’s] ability to detect
a range of microorganisms, at least six
replicate samples of drug product were
spiked with 10 to 100 cfu of microorganisms
from site-specific isolates and … compendial
microorganisms … ” [“The Introduction of
Qualitative Rapid Microbiological Methods for
Drug-Product Testing”, Newby et al.,
Pharmaceutical Technology, Process
Analytical Technology, 2004]
59
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Validation studies evaluated sterility test samples from
primary culture, expansion culture, and final product
culture with a microbial challenge comprised of 10
microbial species. These species included a mix of
commercial reference strains and stressed cells from frozen
archives of environmental isolates and sterility test failures.
During the validation process, FDA recommended challenge
microorganisms … ” [“Automated Rapid Microbiological
Methods for the Biopharmaceutical Industry: Selection,
Validation, and Implementation for an Autologous Cell
Therapy Product”, Duguid & du Moulin, American
Pharmaceutical Review, June 2009]
 “Additional considerations [for RMM validation] may be
provided with regard to ... environmental isolates.”
[“Revision of PDA Technical Report Number 33”, Miller and
Moldenhauer, American Pharmaceutical Review, February 1,
2010] PDA Technical Report 33, Evaluation, Validation and
Implementation of New Microbiological Testing Methods, May 2000
60
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Selection of In-House Isolates for Use
in Compendial Testing
Risk
61
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Depends upon the test itself, and upon
the nature of the manufacturing process
and final product.
 Risk
◦ Assessment
◦ Management
◦ Mitigation
62
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 21 CFR 211.113(a) : “Appropriate written
procedures, designed to prevent
objectionable microorganisms in drug
products not required to be sterile, shall be
established and followed.”
 21 CFR 211.113(b): “Appropriate written
procedures, designed to prevent
microbiological contamination of drug
products purporting to be sterile, shall be
established and followed. Such procedures
shall include validation of all aseptic and
sterilization processes.”
63
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
“Case Studies of Microbial Contamination in Biologic Product
Manufacturing”, Suvarna et al., American Pharmaceutical
Review, 2011.
64
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “HACCP [Hazard Analysis Critical Control Point] might be
used to identify and manage risks associated with physical,
chemical, and biological hazards (including microbiological
contamination).” ICH Q9, “Quality Risk Management”,
2005]
 “Where warranted, a risk-based assessment of the relevant
factors [regarding recovery of unspecified microorganisms]
is conducted by personnel with specialized training in
microbiology and in the interpretation of microbiological
data. For raw materials, the assessment takes account of
the processing to which the product is subjected, the
current technology of testing, and the availability of
materials of the desired quality.” [USP <1111>
“Microbiological Examination of Nonsterile Products:
Acceptance Criteria for Pharmaceutical Preparations and
Substances for Pharmaceutical Use”]
65
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Since the microbial quality of pharmaceutical
products is a function of microorganisms
introduced through excipients, the significance of
microorganisms recovered from excipients should
be evaluated in terms of the number and type of
organisms, whether or not they will survive the
manufacturing process, their ability to grow in
the product formulation, the use of the product
and the potential hazard to the user.”
[“Microbiological Considerations When Selecting
Excipients During Product Development”,
Montgomery and Manu-Tawiah, American
Pharmaceutical Review, 2004]
66
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Design of the manufacturing facility
and environmental monitoring (EM)
program
 “Where microbiological specifications
have been established for the
intermediate or API, facilities should
also be designed to limit exposure to
objectionable microbiological
contaminants, as appropriate.” [ICH
Q7A, “Good Manufacturing Practice
Guidance for Active Pharmaceutical
Ingredients”, 2000]
67
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Environmental monitoring program
◦ Characterization of normal facility microflora
◦ Identifying shifts in microflora, seasonal trends
 PDA Technical Report No. 13, “Fundamentals
of an Environmental Monitoring Program”,
September/October 2001
◦ “Characterizing microorganisms recovered from
environmental and personnel monitoring is an
important part of surveillances programs”
◦ “… routine characterization should continue to
determine whether isolates are part of the normal
microbial flora or represent something different.”
68
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 PDA Technical Report No. 13,
“Fundamentals of an Environmental
Monitoring Program”,
September/October 2001
◦ “A change in the microbial flora or the
introduction of a previously undetected
species might signify a change in a
system that should be investigated”
◦ “Characterizations can be useful clues as
to the possible source of isolates.”
69
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “A well-established microbial EM program must
identify, at least at the genus level, microorganisms
isolated from samples that reach the alert and action
limits established. Evaluation of the isolates is
necessary and would be evaluated for their ability to
grow in the non-sterile product present at the time of
sampling. It is necessary to make a list of
microorganisms isolated and identified at least at the
genus level during the first year of implementation.
This list is crucial to identify the profile of
microorganism species found in production areas, its
possible origin, trends, and seasonal peaks.”
[“Bioburden Method Suitability for Cleaning and
Sanitation Monitoring: How Far Do We Have to Go?”,
Salaman-Byron, Pharmaceutical Technology, 2010]
70
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 “Although drugmakers have begun to perform
environmental monitoring in their nonsterile
manufacturing facilities, many companies are
uncertain about how to interpret the data and
develop alert and action levels … The industry should
record the types and numbers of microorganisms that
it identifies in its environmental-monitoring programs
and evaluate the information on a quarterly basis …
This strategy could provide guidance, based on
scientific rationale, for assessing and controlling the
risk of contamination.” [“Manufacturers Recalibrate
Microbial Control for Nonsterile Drugs”, Greb,
Pharmaceutical Technology, Equipment and
Processing Report, February 16, 2011]
71
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Selection of In-House Isolates for Use
in Compendial Testing
Strategies
72
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Two bases for selection of isolates
◦ Demonstrating adequate reduction of a high-
level presence of an organism
 Disinfectant efficacy testing (“challenge”)
◦ Demonstrating adequate recovery of a low-
level presence of an organism
 Disinfectant efficacy testing (“recovery”)
 Media growth promotion testing
 Test method suitability/qualification
 Rapid Microbiological Methods
73
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Disinfectant efficacy testing
◦ Microflora of the manufacturing environment
◦ Typically evaluated in EM trend reports
◦ Undesirable trends (e.g., seasonal)
◦ Recovery of organisms considered
“objectionable” or “of concern”
74
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Example …
 EM trend reports describe historical and consistent
seasonal “blooms” of filamentous fungi (mold) during the
autumn season.
 Corrective action = frequent sanitization with a sporicidal
agent
 Characterize (ID) the species of mold(s).
 Include the mold(s) in disinfectant efficacy testing.
 Importantly, the early recovery of the species (detected
through EM) signals the need to proactively implement
frequent sanitization with a sporicidal agent.
 Don’t react to the “bloom” … Risk mitigation!
75
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Example …
 Introduction of an “objectionable” organism into
the facility
◦ Recurring incident?
◦ Ingress into more stringently classified areas as a result
of material, personnel or equipment flow?
 Conclusion
◦ Adverse trend?
◦ Shift in the facility’s normal microflora?
 Include the organism in disinfectant efficacy
testing.
76
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Example …
 EM excursion
 Data trend analysis
 Conclusion = adverse trend
 Include the organism(s) in disinfectant
efficacy testing.
77
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Subjecting the organisms to disinfectant
efficacy testing …
◦ Lack of efficacy demonstrates the need to
change disinfectant
◦ Demonstrating efficacy implicates inadequate
cleaning procedures/practices
 Include the organisms in EM media growth
promotion testing.
78
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Inclusion of in-house isolates in media
growth promotion testing
◦ Media used for EM and clean utility monitoring
◦ Media used for raw material, component, in-
process product and finished product testing
79
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Media used for raw material and
component testing
◦ Previously recovered “objectionable” or
fastidious organisms from non-sterile materials
◦ Previously recovered contaminants from sterile
materials
80
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Media used for in-process product testing
◦ Review of historical data
◦ Critical control points
 Media used for finished product testing
◦ For non-sterile products, the approach is
similar to that of selecting isolates from non-
sterile raw materials and components.
◦ For sterile products, include isolates recovered
from previous sterility test or media fill failures.
81
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Test method suitability/qualification
◦ Employ the same strategy as that used for
selection of isolates for growth promotion of
media used for raw material, component, in-
process product and finished product testing.
 “Objectionable” and fastidious organisms
 Sterility failures
 Media fill failures
82
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
 Sources of information useful for selecting
in-house isolates
◦ Annual product reviews
◦ EM and clean utility trend reports
◦ Process validation
◦ Cleaning validation
◦ Media fills
 Organisms representing risk
83
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Review
 Current Industry Debate Over the Use of In-
House Isolates in Compendial Testing
 Disinfectant Efficacy Testing
 Media Growth Promotion Testing
 Test Method Suitability/Qualification
 Rapid Microbiological Methods
 Selection of In-House Isolates for Use in
Compendial Testing
84
In-House Microbial Isolates in Compendial
Testing: Regulatory Requirements
Robert Westney
Director of Quality and Operations
Cryologics, Inc.
(610) 847-8781
rwestney@cryologics.com
www.Cryologics.com
Links to references:
http://www.cryologics.com/resources/bibliography

More Related Content

What's hot

2.6.12. microbiological examination of non sterile products (total viable aer...
2.6.12. microbiological examination of non sterile products (total viable aer...2.6.12. microbiological examination of non sterile products (total viable aer...
2.6.12. microbiological examination of non sterile products (total viable aer...Guide_Consulting
 
USP &lt;1116> and its impact on Microbiology
USP &lt;1116> and its impact on MicrobiologyUSP &lt;1116> and its impact on Microbiology
USP &lt;1116> and its impact on MicrobiologyTim Sandle, Ph.D.
 
Risk analysis in sterile operation
Risk analysis in sterile operationRisk analysis in sterile operation
Risk analysis in sterile operationTim Sandle, Ph.D.
 
computer system validation
computer system validationcomputer system validation
computer system validationGopal Patel
 
Application of microbiological data
Application of microbiological dataApplication of microbiological data
Application of microbiological dataTim Sandle, Ph.D.
 
Control on Cleanroom Environmental Monitoring (Pharmaceutical)
Control on Cleanroom Environmental Monitoring (Pharmaceutical)Control on Cleanroom Environmental Monitoring (Pharmaceutical)
Control on Cleanroom Environmental Monitoring (Pharmaceutical)Srinath Sasidharan
 
Auditing of microbiology laboratory
Auditing of microbiology laboratoryAuditing of microbiology laboratory
Auditing of microbiology laboratoryNikita Amane
 
Sterile Products Manufacturing-EU GMP Annex-1.pptx
Sterile Products Manufacturing-EU GMP Annex-1.pptxSterile Products Manufacturing-EU GMP Annex-1.pptx
Sterile Products Manufacturing-EU GMP Annex-1.pptxObyDulla1
 
Cleaning validation
Cleaning validationCleaning validation
Cleaning validationdinesh pawar
 
Anvisa Vs WHO guidelines
Anvisa Vs WHO guidelinesAnvisa Vs WHO guidelines
Anvisa Vs WHO guidelinesNayan Jha
 
Computer System Validation - The Validation Master Plan
Computer System Validation - The Validation Master PlanComputer System Validation - The Validation Master Plan
Computer System Validation - The Validation Master PlanWolfgang Kuchinke
 
Basic Concepts of Cleaning validation
Basic Concepts of Cleaning validationBasic Concepts of Cleaning validation
Basic Concepts of Cleaning validationAbhishek Morris
 
Microbiology Laboratory Qualifications and Microbial Testing Techniques
Microbiology Laboratory Qualifications and Microbial Testing TechniquesMicrobiology Laboratory Qualifications and Microbial Testing Techniques
Microbiology Laboratory Qualifications and Microbial Testing TechniquesKavitaBhatt14
 
Environmental monitoring
Environmental monitoringEnvironmental monitoring
Environmental monitoringPrakash Ghimire
 

What's hot (20)

2.6.12. microbiological examination of non sterile products (total viable aer...
2.6.12. microbiological examination of non sterile products (total viable aer...2.6.12. microbiological examination of non sterile products (total viable aer...
2.6.12. microbiological examination of non sterile products (total viable aer...
 
USP &lt;1116> and its impact on Microbiology
USP &lt;1116> and its impact on MicrobiologyUSP &lt;1116> and its impact on Microbiology
USP &lt;1116> and its impact on Microbiology
 
Risk analysis in sterile operation
Risk analysis in sterile operationRisk analysis in sterile operation
Risk analysis in sterile operation
 
Pharmaceutical microbiology
Pharmaceutical microbiologyPharmaceutical microbiology
Pharmaceutical microbiology
 
computer system validation
computer system validationcomputer system validation
computer system validation
 
Usp 1116
Usp 1116Usp 1116
Usp 1116
 
Application of microbiological data
Application of microbiological dataApplication of microbiological data
Application of microbiological data
 
Control on Cleanroom Environmental Monitoring (Pharmaceutical)
Control on Cleanroom Environmental Monitoring (Pharmaceutical)Control on Cleanroom Environmental Monitoring (Pharmaceutical)
Control on Cleanroom Environmental Monitoring (Pharmaceutical)
 
Auditing of microbiology laboratory
Auditing of microbiology laboratoryAuditing of microbiology laboratory
Auditing of microbiology laboratory
 
Good Laboratory Practice
Good Laboratory PracticeGood Laboratory Practice
Good Laboratory Practice
 
Autoclave validation maliba
Autoclave validation malibaAutoclave validation maliba
Autoclave validation maliba
 
New EMA Requirements : Cleaning Validation Limits based on PDE
New EMA Requirements : Cleaning Validation Limits based on PDE New EMA Requirements : Cleaning Validation Limits based on PDE
New EMA Requirements : Cleaning Validation Limits based on PDE
 
Sterile Products Manufacturing-EU GMP Annex-1.pptx
Sterile Products Manufacturing-EU GMP Annex-1.pptxSterile Products Manufacturing-EU GMP Annex-1.pptx
Sterile Products Manufacturing-EU GMP Annex-1.pptx
 
Cleaning validation
Cleaning validationCleaning validation
Cleaning validation
 
Anvisa Vs WHO guidelines
Anvisa Vs WHO guidelinesAnvisa Vs WHO guidelines
Anvisa Vs WHO guidelines
 
Computer System Validation - The Validation Master Plan
Computer System Validation - The Validation Master PlanComputer System Validation - The Validation Master Plan
Computer System Validation - The Validation Master Plan
 
Basic Concepts of Cleaning validation
Basic Concepts of Cleaning validationBasic Concepts of Cleaning validation
Basic Concepts of Cleaning validation
 
Bioburden
Bioburden  Bioburden
Bioburden
 
Microbiology Laboratory Qualifications and Microbial Testing Techniques
Microbiology Laboratory Qualifications and Microbial Testing TechniquesMicrobiology Laboratory Qualifications and Microbial Testing Techniques
Microbiology Laboratory Qualifications and Microbial Testing Techniques
 
Environmental monitoring
Environmental monitoringEnvironmental monitoring
Environmental monitoring
 

Viewers also liked

Viewers also liked (8)

Ehab CV
Ehab CVEhab CV
Ehab CV
 
ppt
pptppt
ppt
 
Validation protocol for hold time study of collected water samples
Validation protocol for hold time study of collected water samplesValidation protocol for hold time study of collected water samples
Validation protocol for hold time study of collected water samples
 
WHO Good Practices for Microbiology Labs.
WHO Good Practices for Microbiology Labs.WHO Good Practices for Microbiology Labs.
WHO Good Practices for Microbiology Labs.
 
Developments in regulatory requirements
Developments in regulatory requirements Developments in regulatory requirements
Developments in regulatory requirements
 
Bioburden Testing
Bioburden TestingBioburden Testing
Bioburden Testing
 
Validation of Microbiological Methods
Validation of Microbiological MethodsValidation of Microbiological Methods
Validation of Microbiological Methods
 
Sterility testing USP 71
Sterility testing USP 71Sterility testing USP 71
Sterility testing USP 71
 

Similar to In-House Microbial Isolates in Compendial Testing: Regulatory Requirements

Microbiological culture sensitivity test
Microbiological culture sensitivity testMicrobiological culture sensitivity test
Microbiological culture sensitivity testSuhas Reddy C
 
Evaluation of disinfectant
Evaluation of disinfectantEvaluation of disinfectant
Evaluation of disinfectantIkenna Godwin
 
D7 Laundry Sanitizer and Disinfectant Test
D7 Laundry Sanitizer and Disinfectant Test D7 Laundry Sanitizer and Disinfectant Test
D7 Laundry Sanitizer and Disinfectant Test Casey Latto
 
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVE
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVEEVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVE
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVEISF COLLEGE OF PHARMACY MOGA
 
antimicrobial chemotherapy
antimicrobial chemotherapyantimicrobial chemotherapy
antimicrobial chemotherapyAshish Jawarkar
 
Testing 68
Testing 68Testing 68
Testing 68guru99
 
Testing 136
Testing 136Testing 136
Testing 136guru99
 
Biocompatibility testing of "BIOMATERIALS"
Biocompatibility testing of "BIOMATERIALS"Biocompatibility testing of "BIOMATERIALS"
Biocompatibility testing of "BIOMATERIALS"Swapnil Singh
 
David Glass BIO World Congress Synthetic Biology Regulation july 2015
David Glass BIO World Congress Synthetic Biology Regulation july 2015David Glass BIO World Congress Synthetic Biology Regulation july 2015
David Glass BIO World Congress Synthetic Biology Regulation july 2015David Glass
 
Environmental Microbiology - Screening of Producer strain
Environmental Microbiology - Screening of Producer strainEnvironmental Microbiology - Screening of Producer strain
Environmental Microbiology - Screening of Producer strainMiracleLivinus1
 
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptx
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptxCAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptx
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptxLarry B. Abang
 
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...UBMCanon
 
Standardized Antibacterial Material Testing Methods
Standardized Antibacterial Material Testing MethodsStandardized Antibacterial Material Testing Methods
Standardized Antibacterial Material Testing MethodsAlexTrebek
 
class evaluation of disinfectant.pdf
class evaluation of disinfectant.pdfclass evaluation of disinfectant.pdf
class evaluation of disinfectant.pdfAjithPc3
 
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS METHOD FOR TESTING DISINFEC...
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS  METHOD FOR TESTING DISINFEC...TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS  METHOD FOR TESTING DISINFEC...
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS METHOD FOR TESTING DISINFEC...VeerendraMaravi
 
Materi Seminar Mikrobiologi Rapid microbiological methods
Materi Seminar Mikrobiologi Rapid microbiological methods Materi Seminar Mikrobiologi Rapid microbiological methods
Materi Seminar Mikrobiologi Rapid microbiological methods Guide_Consulting
 
Microbiological culture sensitivity test
Microbiological culture sensitivity testMicrobiological culture sensitivity test
Microbiological culture sensitivity testAkhil Joseph
 

Similar to In-House Microbial Isolates in Compendial Testing: Regulatory Requirements (20)

Microbiological culture sensitivity test
Microbiological culture sensitivity testMicrobiological culture sensitivity test
Microbiological culture sensitivity test
 
Evaluation of disinfectant
Evaluation of disinfectantEvaluation of disinfectant
Evaluation of disinfectant
 
D7 Laundry Sanitizer and Disinfectant Test
D7 Laundry Sanitizer and Disinfectant Test D7 Laundry Sanitizer and Disinfectant Test
D7 Laundry Sanitizer and Disinfectant Test
 
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVE
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVEEVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVE
EVALUATION OF EFFICACY OF ANTIMICOBIAL PRESERVATIVE
 
antimicrobial chemotherapy
antimicrobial chemotherapyantimicrobial chemotherapy
antimicrobial chemotherapy
 
Testing 68
Testing 68Testing 68
Testing 68
 
Testing 136
Testing 136Testing 136
Testing 136
 
Biocompatibility testing of "BIOMATERIALS"
Biocompatibility testing of "BIOMATERIALS"Biocompatibility testing of "BIOMATERIALS"
Biocompatibility testing of "BIOMATERIALS"
 
Pharma micro myths (sandle)
Pharma micro myths (sandle)Pharma micro myths (sandle)
Pharma micro myths (sandle)
 
David Glass BIO World Congress Synthetic Biology Regulation july 2015
David Glass BIO World Congress Synthetic Biology Regulation july 2015David Glass BIO World Congress Synthetic Biology Regulation july 2015
David Glass BIO World Congress Synthetic Biology Regulation july 2015
 
Environmental Microbiology - Screening of Producer strain
Environmental Microbiology - Screening of Producer strainEnvironmental Microbiology - Screening of Producer strain
Environmental Microbiology - Screening of Producer strain
 
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptx
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptxCAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptx
CAUSES OF ANTIBIOTIC RESISTANCE IN SUSCEPTIBILTY TESTING.pptx
 
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...
Innovative Medical Devices: Developing Multidisciplinary Safety & Efficacy Te...
 
Standardized Antibacterial Material Testing Methods
Standardized Antibacterial Material Testing MethodsStandardized Antibacterial Material Testing Methods
Standardized Antibacterial Material Testing Methods
 
class evaluation of disinfectant.pdf
class evaluation of disinfectant.pdfclass evaluation of disinfectant.pdf
class evaluation of disinfectant.pdf
 
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS METHOD FOR TESTING DISINFEC...
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS  METHOD FOR TESTING DISINFEC...TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS  METHOD FOR TESTING DISINFEC...
TESTING OF DISINFECTANT CLASSES OF DISINFECTANTS METHOD FOR TESTING DISINFEC...
 
Discussion10
Discussion10Discussion10
Discussion10
 
Good laboratory practises
Good laboratory practisesGood laboratory practises
Good laboratory practises
 
Materi Seminar Mikrobiologi Rapid microbiological methods
Materi Seminar Mikrobiologi Rapid microbiological methods Materi Seminar Mikrobiologi Rapid microbiological methods
Materi Seminar Mikrobiologi Rapid microbiological methods
 
Microbiological culture sensitivity test
Microbiological culture sensitivity testMicrobiological culture sensitivity test
Microbiological culture sensitivity test
 

Recently uploaded

ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...
ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...
ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...JojoEDelaCruz
 
4.16.24 21st Century Movements for Black Lives.pptx
4.16.24 21st Century Movements for Black Lives.pptx4.16.24 21st Century Movements for Black Lives.pptx
4.16.24 21st Century Movements for Black Lives.pptxmary850239
 
Keynote by Prof. Wurzer at Nordex about IP-design
Keynote by Prof. Wurzer at Nordex about IP-designKeynote by Prof. Wurzer at Nordex about IP-design
Keynote by Prof. Wurzer at Nordex about IP-designMIPLM
 
Full Stack Web Development Course for Beginners
Full Stack Web Development Course  for BeginnersFull Stack Web Development Course  for Beginners
Full Stack Web Development Course for BeginnersSabitha Banu
 
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITY
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITYISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITY
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITYKayeClaireEstoconing
 
AUDIENCE THEORY -CULTIVATION THEORY - GERBNER.pptx
AUDIENCE THEORY -CULTIVATION THEORY -  GERBNER.pptxAUDIENCE THEORY -CULTIVATION THEORY -  GERBNER.pptx
AUDIENCE THEORY -CULTIVATION THEORY - GERBNER.pptxiammrhaywood
 
Activity 2-unit 2-update 2024. English translation
Activity 2-unit 2-update 2024. English translationActivity 2-unit 2-update 2024. English translation
Activity 2-unit 2-update 2024. English translationRosabel UA
 
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATION
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATIONTHEORIES OF ORGANIZATION-PUBLIC ADMINISTRATION
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATIONHumphrey A Beña
 
Difference Between Search & Browse Methods in Odoo 17
Difference Between Search & Browse Methods in Odoo 17Difference Between Search & Browse Methods in Odoo 17
Difference Between Search & Browse Methods in Odoo 17Celine George
 
Influencing policy (training slides from Fast Track Impact)
Influencing policy (training slides from Fast Track Impact)Influencing policy (training slides from Fast Track Impact)
Influencing policy (training slides from Fast Track Impact)Mark Reed
 
ANG SEKTOR NG agrikultura.pptx QUARTER 4
ANG SEKTOR NG agrikultura.pptx QUARTER 4ANG SEKTOR NG agrikultura.pptx QUARTER 4
ANG SEKTOR NG agrikultura.pptx QUARTER 4MiaBumagat1
 
Field Attribute Index Feature in Odoo 17
Field Attribute Index Feature in Odoo 17Field Attribute Index Feature in Odoo 17
Field Attribute Index Feature in Odoo 17Celine George
 
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...Postal Advocate Inc.
 
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17Celine George
 
How to Add Barcode on PDF Report in Odoo 17
How to Add Barcode on PDF Report in Odoo 17How to Add Barcode on PDF Report in Odoo 17
How to Add Barcode on PDF Report in Odoo 17Celine George
 
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdf
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdfVirtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdf
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdfErwinPantujan2
 
Concurrency Control in Database Management system
Concurrency Control in Database Management systemConcurrency Control in Database Management system
Concurrency Control in Database Management systemChristalin Nelson
 
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptx
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptxMULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptx
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptxAnupkumar Sharma
 

Recently uploaded (20)

ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...
ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...
ENG 5 Q4 WEEk 1 DAY 1 Restate sentences heard in one’s own words. Use appropr...
 
4.16.24 21st Century Movements for Black Lives.pptx
4.16.24 21st Century Movements for Black Lives.pptx4.16.24 21st Century Movements for Black Lives.pptx
4.16.24 21st Century Movements for Black Lives.pptx
 
Keynote by Prof. Wurzer at Nordex about IP-design
Keynote by Prof. Wurzer at Nordex about IP-designKeynote by Prof. Wurzer at Nordex about IP-design
Keynote by Prof. Wurzer at Nordex about IP-design
 
Full Stack Web Development Course for Beginners
Full Stack Web Development Course  for BeginnersFull Stack Web Development Course  for Beginners
Full Stack Web Development Course for Beginners
 
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITY
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITYISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITY
ISYU TUNGKOL SA SEKSWLADIDA (ISSUE ABOUT SEXUALITY
 
AUDIENCE THEORY -CULTIVATION THEORY - GERBNER.pptx
AUDIENCE THEORY -CULTIVATION THEORY -  GERBNER.pptxAUDIENCE THEORY -CULTIVATION THEORY -  GERBNER.pptx
AUDIENCE THEORY -CULTIVATION THEORY - GERBNER.pptx
 
Activity 2-unit 2-update 2024. English translation
Activity 2-unit 2-update 2024. English translationActivity 2-unit 2-update 2024. English translation
Activity 2-unit 2-update 2024. English translation
 
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATION
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATIONTHEORIES OF ORGANIZATION-PUBLIC ADMINISTRATION
THEORIES OF ORGANIZATION-PUBLIC ADMINISTRATION
 
Difference Between Search & Browse Methods in Odoo 17
Difference Between Search & Browse Methods in Odoo 17Difference Between Search & Browse Methods in Odoo 17
Difference Between Search & Browse Methods in Odoo 17
 
Influencing policy (training slides from Fast Track Impact)
Influencing policy (training slides from Fast Track Impact)Influencing policy (training slides from Fast Track Impact)
Influencing policy (training slides from Fast Track Impact)
 
ANG SEKTOR NG agrikultura.pptx QUARTER 4
ANG SEKTOR NG agrikultura.pptx QUARTER 4ANG SEKTOR NG agrikultura.pptx QUARTER 4
ANG SEKTOR NG agrikultura.pptx QUARTER 4
 
Field Attribute Index Feature in Odoo 17
Field Attribute Index Feature in Odoo 17Field Attribute Index Feature in Odoo 17
Field Attribute Index Feature in Odoo 17
 
Raw materials used in Herbal Cosmetics.pptx
Raw materials used in Herbal Cosmetics.pptxRaw materials used in Herbal Cosmetics.pptx
Raw materials used in Herbal Cosmetics.pptx
 
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...
USPS® Forced Meter Migration - How to Know if Your Postage Meter Will Soon be...
 
FINALS_OF_LEFT_ON_C'N_EL_DORADO_2024.pptx
FINALS_OF_LEFT_ON_C'N_EL_DORADO_2024.pptxFINALS_OF_LEFT_ON_C'N_EL_DORADO_2024.pptx
FINALS_OF_LEFT_ON_C'N_EL_DORADO_2024.pptx
 
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17
Incoming and Outgoing Shipments in 3 STEPS Using Odoo 17
 
How to Add Barcode on PDF Report in Odoo 17
How to Add Barcode on PDF Report in Odoo 17How to Add Barcode on PDF Report in Odoo 17
How to Add Barcode on PDF Report in Odoo 17
 
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdf
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdfVirtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdf
Virtual-Orientation-on-the-Administration-of-NATG12-NATG6-and-ELLNA.pdf
 
Concurrency Control in Database Management system
Concurrency Control in Database Management systemConcurrency Control in Database Management system
Concurrency Control in Database Management system
 
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptx
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptxMULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptx
MULTIDISCIPLINRY NATURE OF THE ENVIRONMENTAL STUDIES.pptx
 

In-House Microbial Isolates in Compendial Testing: Regulatory Requirements

  • 1. In-House Microbial Isolates in Compendial Testing Regulatory Requirements 1
  • 2. In-House Microbial Isolates in Compendial Testing: Regulatory Requirements 2 Agenda  Current Industry Debate Over the Use of In- House Isolates in Compendial Testing  Disinfectant Efficacy Testing  Media Growth Promotion Testing  Test Method Suitability/Qualification  Rapid Microbiological Methods  Selection of In-House Isolates for Use in Compendial Testing
  • 3. 3 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Current Industry Debate Over the Use of In-House Isolates in Compendial Testing
  • 4. 4 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements "Good practice includes the periodic challenge of prepared media with low levels of organisms. This includes USP indicator organisms as well as normal flora." U.S. Food and Drug Administration: “Guide to Inspections of Microbiological Pharmaceutical Quality Control Laboratories” (1993)
  • 5. 5 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements PMF List (2010)  “As soon as an environmental isolate is put onto growth media, it is no longer an ‘environmental’ isolate’.”  “EM [environmental monitoring] organisms will stop to behave as such after a few transfers.”  “Environmental isolates are often mismanaged by the microbiology lab.”  “Many companies simply don't have the qualified equipment and personnel to preserve and maintain stock cultures of their environmental bugs.”  “This is one of the problems with using 483 observations as ‘cGMP’. They are not. They are the observations of one inspector who may or may not be knowledgeable in microbiology.”
  • 6. 6 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements The arguments against the inclusion of in-house isolates fall into three categories: 1. An “environmental” isolate, once cultured in the Microbiology laboratory, loses its “wild-type” traits. 2. Preparing an in-house microbial isolate to create the organism concentration necessary for compendial testing is too problematic to be practical. 3. The regulatory expectation that in-house microbial isolates be included in compendial testing is represented by only a few “rogue” FDA inspectors, and is not an Agency-wide expectation.
  • 7. 7 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Does an “environmental” isolate lose its “wild-type” traits after being cultured?  There has been no published empirical evidence that an in-house microbial isolate either does or does not lose its “wild-type” traits upon culturing.  United States Pharmacopeia (USP <61>): “Seed-lot culture maintenance techniques (seed-lot systems) are used so that the viable microorganisms used for inoculation are not more than five passages removed from the original master seed-lot”.  Although in most cases an in-house isolate likely becomes physiologically more “robust” upon culturing, it is reasonable to assume that a limited number of passages from the source culture allows the microorganism to retain its “wild-type” genetic traits.
  • 8. 8 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements “It’s too difficult to be practical” does not address the scientific merit of including in-house isolates in compendial testing.  The basic process includes preparation of a suspension of unknown concentration, performing serial dilutions and plate counts to determine the concentration, and then standardizing the suspension to the desired concentration.  During the incubation period for serial dilution plates, the suspension is typically held under refrigerated conditions for several days.  During this time, the concentration of the organism in suspension may change, resulting in either a decrease or increase.  Standardization and final use of this suspension may therefore result in a “miss” in terms of its assumed concentration, discovered only after testing is complete.
  • 9. 9 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements
  • 10. 10 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Are 483 observations and Warning Letters limited to just a few inspectors?  “Compliance versus science”  The increasing trend in citing firms for not meeting this requirement demonstrates that the Agency’s SMEs recognize the scientific merit of including in-house isolates in compendial testing.  Defending against this expectation is a challenge!
  • 11. 11 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Disinfectant Efficacy Testing Methodology
  • 12. 12 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Point of clarification …  “Disinfectant”: A chemical agent used on inanimate objects (e.g., floors, walls, sinks) to destroy virtually all recognized pathogenic microorganisms, but not necessarily all microbial forms (e.g., bacterial endospores). [Centers for Disease Control and Prevention]  “Sanitizer”: A chemical agent that simultaneously cleans and disinfects.
  • 13. 13 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 1: Determine the test method ◦ Tube method: Inoculate dilutions of the disinfectant and determine the microbial reduction. Typically referred to as “use- dilution” testing. ◦ Coupon method: Inoculate the surfaces of coupons representing facility materials of construction. Expose them to disinfectant. Remove the inoculum. Determine log reduction. "Six Steps to Qualifying Disinfectants“, Deborah Ensign, Microtest Laboratories, Inc., 2011
  • 14. 14 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 2: Determine the Challenge Organisms ◦ American Type Culture Collection (ATCC) organisms (gram-negative, gram-positive, spore-former, fungi) ◦ Environmental isolates
  • 15. 15 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 3: Determine the Surface Types to be Tested ◦ Examples: stainless steel, glass, plastic, tile, plexiglas ◦ 2” x 2” coupons ◦ Sterilize or disinfect before using.
  • 16. 16 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 4: Determine Expiration of Disinfectants ◦ Use the same concentration and contact exposure time used in the facility. ◦ Use the worst-case expiration date for each disinfectant.
  • 17. 17 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 5: Method Validation ◦ Critical! ◦ Typically called the “recovery” part of the test ◦ Must demonstrate adequate recovery of the challenge organisms in the presence of the disinfectants. ◦ Inoculate the test system (i.e., the medium exposed to disinfectant) with a low-level challenge of test organism. Include a control that has not been exposed. ◦ Recovery: 50-200% of control
  • 18. 18 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Step 6: Efficacy Testing ◦ USP <1072>, “Disinfectants and Antiseptics” ◦ Typically called the “challenge” part of the test. ◦ Inoculate tube/coupon. ◦ Expose to the desired concentration of the disinfectant for the desired contact time. ◦ Demonstrate 2-log reduction for spore-formers. ◦ Demonstrate 3-log reduction for vegetative bacteria.
  • 19. 19 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements
  • 20. 20 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Disinfectant Efficacy Testing Compliance Deficiencies
  • 21. 21 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Disinfectant effectiveness studies against representative microorganisms and/or specific in-house isolates were not conducted for cleaning agents used in your facility to disinfect production areas, including aseptic areas.” [FDA Warning Letter, March 28, 2008]  “No rationale was provided for the ATCC [American Type Culture Collection] organisms used nor was [sic] actual EM isolates used for the study.” [FDA Memorandum, Biologics License Application, 2009]
  • 22. 22 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “The firm was unable to provide scientific rationale for the use of the selected organisms used in the Disinfectant Efficacy study. These organisms were not representative of organisms isolated from the facility nor were they representative of the USP guidelines.” [FDA 483 Observation, May 25, 2011]  “Your response states that a supplemental disinfectant efficacy study, using mold spores of in house isolates on various surfaces, will be performed and completed by [redacted]. We suggest that this proposed study be conducted as soon as possible.” [FDA Warning Letter, July 12, 2012]
  • 23. 23 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Disinfectant Efficacy Testing Industry Guides
  • 24. 24 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Routinely used disinfectants should be effective against the normal microbial vegetative flora recovered from the facility... If indicated, microorganisms associated with adverse trends can be investigated as to their sensitivity to the disinfectants employed in the cleanroom in which the organisms were isolated.” [FDA Guidance for Industry: Sterile Drug Products Produced by Aseptic Processing - Current Good Manufacturing Practice, September 2004]  “If using an Association of Official Analytical Chemists (AOAC) method, microorganisms specified in the reference which are most likely to be found in the manufacturing environment should be used and tests performed on microbial isolates frequently found in the environment can provide additional information on the effectiveness of disinfectants.” [“Regulatory Aspects Concerning the Quality Controls of Microbiological and Nonviable Particulate Contamination in Pharmaceutical Manufacturing”, Oji, (FDA), American Pharmaceutical Review, January/February 2004]
  • 25. 25 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements United States Pharmacopeia, <1072> “Disinfectant and Antiseptics”  “… the most frequently isolated microorganisms from an environmental monitoring program may be periodically subjected to use-dilution testing with the agents used in the disinfection program to confirm their susceptibility, as there are real differences among different species in resistance to the lethal effects of different sanitizers.”  “To demonstrate the efficacy of a disinfectant within a pharmaceutical manufacturing environment, it may be deemed necessary to conduct the following tests: (1) use-dilution tests (screening disinfectants for their efficacy at various concentrations and contact times against a wide range of standard test organisms and environmental isolates); (2) surface challenge tests (using standard test microorganisms and microorganisms that are typical environmental isolates, applying disinfectants to surfaces at the selected use concentration with a specified contact time, and determining the log reduction of the challenge microorganisms); and (3) a statistical comparison of the frequency of isolation and numbers of microorganisms isolated prior to and after the implementation of a new disinfectant.”
  • 26. 26 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “It is a sound practice to perform challenge testing of the selected sanitizers/disinfectants with isolates routinely recovered by the environmental monitoring program. This establishes the practical effectiveness of the disinfectants.” [Parenteral Drug Association Technical Report No. 13, “Fundamentals of an Environmental Monitoring Program”, September/October 2001]  “Regulatory authorities now expect evidence of the efficacy of disinfection agents against environmental isolates.” [ASTM E2614 – 08, Standard Guide for Evaluation of Cleanroom Disinfectants]
  • 27. 27 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Disinfectant Efficacy Testing Industry Literature
  • 28. 28 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Validation of sanitising agents for effectiveness against isolated organisms found in cleanroom environments is increasingly becoming an area of concern to both manufacturers and regulatory agencies.” [“Surface Disinfectant Validations”, Nelson Laboratories, Inc., 2004]  “It is generally recommended to use fungal spore suspensions of both reference cultures and environmental isolates... Regulatory authorities also expect to see the specific environmental isolates most frequently found in the facility included in the disinfectant effectiveness testing.” [“Control Strategies for Fungal Contamination in Cleanrooms”, Lopolito et al., Controlled Environments Magazine, September 2007]
  • 29. 29 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “… users are expected to challenge disinfectants not only with standard test organisms but also with facility environmental isolates because commercially available microorganisms behave quite differently from their ‘wild’ counterparts. Selection of the test organisms is crucial and an important issue to the regulatory agencies, especially when it comes to environmental isolates.” [“Microbial Limit and Bioburden Tests: Validation Approaches and Global Requirements”, Clontz, October 14, 2008]  “...it is crucial to make an educated investment in antimicrobial products that are effective against your specific mold isolates.” [“Evaluating the Activity of Disinfectants Against Fungi”, Polarine et al., CleanRooms, Volume 23, No. 2, February 2009]
  • 30. 30 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “…scientifically-based references and conventional wisdom used to select these products does not alleviate drug manufacturers of the requirement to validate disinfectants, sporicides, and even isopropyl alcohol for use in facilities under actual use conditions against environmental isolates.” [“Prevention of Microbial Contamination“, Kopis Sartain and Polarine, Pharmaceutical Technology, June 2, 2011  “Disinfectant Efficacy Studies should be considered as a fundamental requirement during the development of qualifications of disinfectants on various surfaces with both ATCC and in-house isolates.” [Friedman, Blog, August 15, 2011]
  • 31. 31 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Disinfectant testing involves challenging the disinfectant solution (as a suspension test) and challenging different surface materials with disinfectant and a range of different microorganisms including isolates from the facility.” [ “Cleanroom Cleaning and Disinfection: Eight Steps for Success”, Sandle, Controlled Environments Magazine, March 2012]  “This study clearly demonstrates that the most frequently isolated microorganisms from an environmental monitoring program may be periodically subjected to microbroth dilution testing with cleanroom disinfectant agents used in the disinfection program to confirm their sensitivity profile.” [“In vitro Antifungal Efficacy of Biguanides and Quaternary Ammonium Compounds against Cleanroom Fungal Isolates”, Vijayakumar et al., PDA Journal of Pharmaceutical Science and Technology, May/June 2012]
  • 32. 32 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Media Growth Promotion Testing Methodology
  • 33. 33 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  USP <61>, “Microbiological Examination of Nonsterile Products: Microbial Enumeration Tests”  USP <62>, “Microbiological Examination of Nonsterile Products: Tests for Specified Organisms”  USP <71>, “Sterility Tests”
  • 34. 34 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Challenge the medium with a low-level inoculum of test organism: <100 cfu  Control = Previously qualified medium  ATCC organisms  In-house isolates  Agar: 50-200% recovery  Broth: Turbidity
  • 35. 35 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Media Growth Promotion Testing Compliance Deficiencies
  • 36. 36 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Not limited to aseptic manufacturers! Manufacturers of non-sterile products have been subject to regulatory enforcement.
  • 37. 37 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “… the growth promotion tests for media used during environmental monitoring did not include the use of the normal microbial flora commonly recovered and isolated from the various production and support areas.” [FDA Warning Letter, February 24, 1997]  “Growth promotion qualification of the media used for environmental monitoring does not include a challenge with mold isolates.” [FDA Warning Letter, July 10, 1998]
  • 38. 38 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Growth promotion testing performed on media fill vials does not include evidence the media is capable of detecting environmental isolates found in class 100 filling areas. For example, mold organisms are not used to challenge media, even though mold isolates have been identified in filling room 1.” [FDA Warning Letter, January 11, 2001]  “… your firm does not perform challenge testing to the sterility media with environmental isolates from the environmental monitoring program.” [FDA Warning Letter, October 29, 2010]
  • 39. 39 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Growth promotion studies were deficient because there was “no inclusion of environmental isolates in the growth promotions that are conducted, including growth promotion studies for aseptic media simulations.” [FDA 483 Observation, May 2008]  “… the firm does not test TSA … during growth promotion tests for microorganisms to include for example, molds, yeasts and other potential known environmental contaminants found in the manufacturing facility and/or raw materials.” [FDA 483 Observation, April 30, 2010]
  • 40. 40 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  The FDA expressed its satisfaction that the firm complied with its expectation: “Growth promotion studies were conducted successfully using indicator microorganisms per USP as well as local isolates.” [FDA Memorandum, BLA Recommendation, January 16, 2009]
  • 41. 41 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Media Growth Promotion Testing Industry Guides
  • 42. 42 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “The QC laboratory should determine if USP indicator organisms sufficiently represent production-related isolates. Environmental monitoring and sterility test isolates can be substituted (as appropriate) or added to the growth promotion challenge.” [FDA Guidance for Industry: Sterile Drug Products Produced by Aseptic Processing - Current Good Manufacturing Practice, September 2004]  “… for the Growth Promotion test, representative microflora isolated from the controlled environment or ATCC strain preparations of these isolates may also be used to test media.” [USP <1116>, “Microbiological Evaluation of Clean Rooms and Other Controlled Environments”]
  • 43. 43 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “… microorganisms used in growth- promotion testing may be based on the manufacturer's recommendation for a particular medium, or may include representative environmental isolates.” [USP <1117>, “Microbiological Best Laboratory Practices”]  USP clarifies parenthetically that “these latter are not to be construed as compendial requirements.”
  • 44. 44 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements From PDA Technical Report No. 22, “Process Simulation for Aseptically Filled Products” (2011):  “The growth promotion properties of the incubation media should be evaluated using pharmacopeial methods. The inclusions of tests for environmental organisms or those isolated from sterility test positives are recommended.”  “Growth promotion testing ... is performed using pharmacopeial methods. Consideration should be given to testing with other microorganisms found in the aseptic processing area environment, such as those isolated during environmental and personnel monitoring and sterility test contaminants.”
  • 45. 45 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements From the Pharmaceutical Inspection Convention/Pharmaceutical Inspection Cooperation Scheme (PIC/S):  “The medium selected should be capable of supporting a wide range of microorganisms, which might reasonably be encountered and be based also on the in house flora (e.g. isolates from monitoring etc.).” [Recommendation on the Validation of Aseptic Processes. PI-007-6, 1 January 2011]  “Environmental or fastidious organisms may be used if alternative non-selective enrichment media have been selected for the sterility test.” [Recommendation on Sterility Testing. PI-012-3, 25 September 2007]
  • 46. 46 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Media Growth Promotion Testing Industry Literature
  • 47. 47 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Growth promotion should be demonstrated using organisms listed in USP General Chapter <71> as well as environmental, personnel, and sterility test failure isolates [at the] <100-cfu [colony-forming unit] challenge.” [“Microbial Testing in Support of Aseptic Processing”, Cundell, Pharmaceutical Technology, June 2004]  “In general, a microbial growth medium such as soybean casein digest medium should be used. This media selected should be demonstrated to promote growth of United States Pharmacopoeia (USP) <71> indicated organisms as well as representative isolates identified from environmental monitoring, personal monitoring, and positive sterility test results.” [Environmental Monitoring for Cleanrooms and Controlled Environments, Dixon (Ed.), November 2, 2006.]
  • 48. 48 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “In addition to the compendial organisms required in the [media growth promotion] tests, addition of specific microorganisms of interest could be useful if they have been recovered from past tests (e.g., a Sterility Test contaminant or a frequent environmental monitoring isolate).” [“Quality Control of Microbiological Culture Media”, Sutton, PMF Newsletter, January 2006]  “The media must be challenged with the organisms listed in the current version of the compendia as well as one or more in-house isolates… The in-house cultures used must be qualified as well, with regards to identity and population size. The challenge should be with <100 CFU and the population size must be verified and recorded.” [“Introduction to Sterility Testing: Control of the Environment, Test Limitations, and Investigating Manufacturing Systems”, Mentel, American Pharmaceutical Review, Jan/Feb 2006]
  • 49. 49 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “In addition to type cultures, environmental isolates are commonly used in media testing regimes. These organisms are designed to demonstrate that a particular lot of culture media will grow microorganisms which are representative of the types that are found in the manufacturing environment... The use of such isolates is increasingly becoming a regulatory expectation.” [“Assessment of Culture Media in Pharmaceutical Microbiology”, Sandle, Pharmaceutical Microbiology Blog, April 3, 2012]
  • 50. 50 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Test Method Suitability/Qualification Compliance Deficiencies Industry Guides
  • 51. 51 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  There has been no documented evidence that the FDA has cited a manufacturer for lack of inclusion of in-house isolates in microbiological test method suitability/qualification.  “The test organisms selected should reflect organisms that could be found in the product, process, or manufacturing environment.” [FDA Final Rule on “Amendments to Sterility Test Requirements for Biological Products”, June 4, 2012]  Recent Rule… more regulatory scrutiny in the near future!
  • 52. 52 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Test Method Suitability/Qualification Industry Literature
  • 53. 53 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “There is a strong argument that environmental isolates are the best challenge to media and for validation studies like sterility test validation. They are the most sensitive micro-organisms, having been exposed recently to disinfectants, particular soils etc.” [“The Use of Environmental Isolates”, Sandle, Pharmaceutical Microbiology Blog, January 10, 2010]  “The author highly suggests performing test method suitability studies using wild-type isolates from production surfaces instead of laboratory-adapted strains of bacteria. Wild-type strains are a better representation of the organisms encountered on production areas than those strains that lack wild characteristics.” [“Bioburden Method Suitability for Cleaning and Sanitation Monitoring: How Far Do We Have to Go?”, Salaman-Byron, Pharmaceutical Technology, August 2, 2010]
  • 54. 54 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Rapid Microbiological Methods Compliance Deficiencies Industry Guides
  • 55. 55 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Rapid microbiological methods (RMMs) have become a growing area of advancement over the past several years.  There has been no documented evidence that the FDA has cited a manufacturer for lack of inclusion of in-house isolates in rapid microbiological methods.
  • 56. 56 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “You should develop a panel of microorganisms relevant to the product and process to challenge the performance of your RMM. We recommend that you include in your panel microorganisms which represent the following categories: … ◦ isolates detected in starting materials, ◦ isolates detected by in-process testing or during preliminary product testing, ◦ isolates detected by environmental monitoring of your manufacturing facility, ◦ isolates from your production areas which represent low nutrient and high stress environments …” FDA Guidance for Industry: Validation of Growth-Based Rapid Microbiological Methods for Sterility Testing of Cellular and Gene Therapy Products (Draft), February 2008
  • 57. 57 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Rapid Microbiological Methods Industry Literature
  • 58. 58 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “To demonstrate the [RMM’s] ability to detect a range of microorganisms, at least six replicate samples of drug product were spiked with 10 to 100 cfu of microorganisms from site-specific isolates and … compendial microorganisms … ” [“The Introduction of Qualitative Rapid Microbiological Methods for Drug-Product Testing”, Newby et al., Pharmaceutical Technology, Process Analytical Technology, 2004]
  • 59. 59 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Validation studies evaluated sterility test samples from primary culture, expansion culture, and final product culture with a microbial challenge comprised of 10 microbial species. These species included a mix of commercial reference strains and stressed cells from frozen archives of environmental isolates and sterility test failures. During the validation process, FDA recommended challenge microorganisms … ” [“Automated Rapid Microbiological Methods for the Biopharmaceutical Industry: Selection, Validation, and Implementation for an Autologous Cell Therapy Product”, Duguid & du Moulin, American Pharmaceutical Review, June 2009]  “Additional considerations [for RMM validation] may be provided with regard to ... environmental isolates.” [“Revision of PDA Technical Report Number 33”, Miller and Moldenhauer, American Pharmaceutical Review, February 1, 2010] PDA Technical Report 33, Evaluation, Validation and Implementation of New Microbiological Testing Methods, May 2000
  • 60. 60 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Selection of In-House Isolates for Use in Compendial Testing Risk
  • 61. 61 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Depends upon the test itself, and upon the nature of the manufacturing process and final product.  Risk ◦ Assessment ◦ Management ◦ Mitigation
  • 62. 62 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  21 CFR 211.113(a) : “Appropriate written procedures, designed to prevent objectionable microorganisms in drug products not required to be sterile, shall be established and followed.”  21 CFR 211.113(b): “Appropriate written procedures, designed to prevent microbiological contamination of drug products purporting to be sterile, shall be established and followed. Such procedures shall include validation of all aseptic and sterilization processes.”
  • 63. 63 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements “Case Studies of Microbial Contamination in Biologic Product Manufacturing”, Suvarna et al., American Pharmaceutical Review, 2011.
  • 64. 64 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “HACCP [Hazard Analysis Critical Control Point] might be used to identify and manage risks associated with physical, chemical, and biological hazards (including microbiological contamination).” ICH Q9, “Quality Risk Management”, 2005]  “Where warranted, a risk-based assessment of the relevant factors [regarding recovery of unspecified microorganisms] is conducted by personnel with specialized training in microbiology and in the interpretation of microbiological data. For raw materials, the assessment takes account of the processing to which the product is subjected, the current technology of testing, and the availability of materials of the desired quality.” [USP <1111> “Microbiological Examination of Nonsterile Products: Acceptance Criteria for Pharmaceutical Preparations and Substances for Pharmaceutical Use”]
  • 65. 65 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Since the microbial quality of pharmaceutical products is a function of microorganisms introduced through excipients, the significance of microorganisms recovered from excipients should be evaluated in terms of the number and type of organisms, whether or not they will survive the manufacturing process, their ability to grow in the product formulation, the use of the product and the potential hazard to the user.” [“Microbiological Considerations When Selecting Excipients During Product Development”, Montgomery and Manu-Tawiah, American Pharmaceutical Review, 2004]
  • 66. 66 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Design of the manufacturing facility and environmental monitoring (EM) program  “Where microbiological specifications have been established for the intermediate or API, facilities should also be designed to limit exposure to objectionable microbiological contaminants, as appropriate.” [ICH Q7A, “Good Manufacturing Practice Guidance for Active Pharmaceutical Ingredients”, 2000]
  • 67. 67 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Environmental monitoring program ◦ Characterization of normal facility microflora ◦ Identifying shifts in microflora, seasonal trends  PDA Technical Report No. 13, “Fundamentals of an Environmental Monitoring Program”, September/October 2001 ◦ “Characterizing microorganisms recovered from environmental and personnel monitoring is an important part of surveillances programs” ◦ “… routine characterization should continue to determine whether isolates are part of the normal microbial flora or represent something different.”
  • 68. 68 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  PDA Technical Report No. 13, “Fundamentals of an Environmental Monitoring Program”, September/October 2001 ◦ “A change in the microbial flora or the introduction of a previously undetected species might signify a change in a system that should be investigated” ◦ “Characterizations can be useful clues as to the possible source of isolates.”
  • 69. 69 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “A well-established microbial EM program must identify, at least at the genus level, microorganisms isolated from samples that reach the alert and action limits established. Evaluation of the isolates is necessary and would be evaluated for their ability to grow in the non-sterile product present at the time of sampling. It is necessary to make a list of microorganisms isolated and identified at least at the genus level during the first year of implementation. This list is crucial to identify the profile of microorganism species found in production areas, its possible origin, trends, and seasonal peaks.” [“Bioburden Method Suitability for Cleaning and Sanitation Monitoring: How Far Do We Have to Go?”, Salaman-Byron, Pharmaceutical Technology, 2010]
  • 70. 70 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  “Although drugmakers have begun to perform environmental monitoring in their nonsterile manufacturing facilities, many companies are uncertain about how to interpret the data and develop alert and action levels … The industry should record the types and numbers of microorganisms that it identifies in its environmental-monitoring programs and evaluate the information on a quarterly basis … This strategy could provide guidance, based on scientific rationale, for assessing and controlling the risk of contamination.” [“Manufacturers Recalibrate Microbial Control for Nonsterile Drugs”, Greb, Pharmaceutical Technology, Equipment and Processing Report, February 16, 2011]
  • 71. 71 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Selection of In-House Isolates for Use in Compendial Testing Strategies
  • 72. 72 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Two bases for selection of isolates ◦ Demonstrating adequate reduction of a high- level presence of an organism  Disinfectant efficacy testing (“challenge”) ◦ Demonstrating adequate recovery of a low- level presence of an organism  Disinfectant efficacy testing (“recovery”)  Media growth promotion testing  Test method suitability/qualification  Rapid Microbiological Methods
  • 73. 73 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Disinfectant efficacy testing ◦ Microflora of the manufacturing environment ◦ Typically evaluated in EM trend reports ◦ Undesirable trends (e.g., seasonal) ◦ Recovery of organisms considered “objectionable” or “of concern”
  • 74. 74 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Example …  EM trend reports describe historical and consistent seasonal “blooms” of filamentous fungi (mold) during the autumn season.  Corrective action = frequent sanitization with a sporicidal agent  Characterize (ID) the species of mold(s).  Include the mold(s) in disinfectant efficacy testing.  Importantly, the early recovery of the species (detected through EM) signals the need to proactively implement frequent sanitization with a sporicidal agent.  Don’t react to the “bloom” … Risk mitigation!
  • 75. 75 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Example …  Introduction of an “objectionable” organism into the facility ◦ Recurring incident? ◦ Ingress into more stringently classified areas as a result of material, personnel or equipment flow?  Conclusion ◦ Adverse trend? ◦ Shift in the facility’s normal microflora?  Include the organism in disinfectant efficacy testing.
  • 76. 76 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Example …  EM excursion  Data trend analysis  Conclusion = adverse trend  Include the organism(s) in disinfectant efficacy testing.
  • 77. 77 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Subjecting the organisms to disinfectant efficacy testing … ◦ Lack of efficacy demonstrates the need to change disinfectant ◦ Demonstrating efficacy implicates inadequate cleaning procedures/practices  Include the organisms in EM media growth promotion testing.
  • 78. 78 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Inclusion of in-house isolates in media growth promotion testing ◦ Media used for EM and clean utility monitoring ◦ Media used for raw material, component, in- process product and finished product testing
  • 79. 79 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Media used for raw material and component testing ◦ Previously recovered “objectionable” or fastidious organisms from non-sterile materials ◦ Previously recovered contaminants from sterile materials
  • 80. 80 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Media used for in-process product testing ◦ Review of historical data ◦ Critical control points  Media used for finished product testing ◦ For non-sterile products, the approach is similar to that of selecting isolates from non- sterile raw materials and components. ◦ For sterile products, include isolates recovered from previous sterility test or media fill failures.
  • 81. 81 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Test method suitability/qualification ◦ Employ the same strategy as that used for selection of isolates for growth promotion of media used for raw material, component, in- process product and finished product testing.  “Objectionable” and fastidious organisms  Sterility failures  Media fill failures
  • 82. 82 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements  Sources of information useful for selecting in-house isolates ◦ Annual product reviews ◦ EM and clean utility trend reports ◦ Process validation ◦ Cleaning validation ◦ Media fills  Organisms representing risk
  • 83. 83 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Review  Current Industry Debate Over the Use of In- House Isolates in Compendial Testing  Disinfectant Efficacy Testing  Media Growth Promotion Testing  Test Method Suitability/Qualification  Rapid Microbiological Methods  Selection of In-House Isolates for Use in Compendial Testing
  • 84. 84 In-House Microbial Isolates in Compendial Testing: Regulatory Requirements Robert Westney Director of Quality and Operations Cryologics, Inc. (610) 847-8781 rwestney@cryologics.com www.Cryologics.com Links to references: http://www.cryologics.com/resources/bibliography