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ENTREZ
AYEBALE CHARITY 20/U/0412
KIRABO PAMELA 20/U/12092/PS
KAGO SIMON PETER 20/U/0410
• ENTREZ – is a molecular biology database and retrieval system
developed by the National Center for Biotechnology Information
(NCBI).
• It is an entry point for exploring distinct but integrated databases.
• Retrieval of huge and ever increasing database is one of the
important task for users in bioinformatics.
• It provides access to all NCBI databases simultaneously with a single
query string and user interface.
Background of Entrez
• In 1991, Entrez was introduced in CD form.
• In 1993, a client-server version of the software provided connectivity
with the internet.
• In 1994, NCBI established a website, and Entrez was part of this initial
release.
• In 2001, Entrez bookshelf was release and in 2003, the Entrez Gene
database was developed.
Features of Entrez
• It is a molecular biology database and retrieval system
• Entrez also allows Batch downloads of large search results.
• Also known as an integrated database and its cross-referenced
• It is an entry point for exploring distinct but integrated data bases.
• Easy to use and is highly convenient
• User don’t have to visit multiple database as it displays all the links of
information on single web page
• It allows text based search for a wide variety of data , such as
annotated genetic sequence information , citations , abstract full
papers
• It uses Boolean operator
How to use Entrez
• Open Google /chrome
• Type -Entrez
• Select Entrez from upper panel
• Type any biological gene or protein
• Click search
Guide video of how to use Entrez.
References
• Entrez: Molecular Biology Database and Retrieval System, Schuler GD,
Epstein JA, Ohkawa H, Kans JA, Methods Enzymol. 266, 141-62, 1996.
(http:/www.ncbi.nlm.nih.gov/Entrez/).
• vlab.amrita.edu,. (2012). Retrieving sequence data from Entrez.
Retrieved 9th March 2024, from
vlab.amrita.edu/?sub=3&brch=273&sim=1437&cnt=2.

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Presentation on entrez as used in bioinformatics

  • 1. ENTREZ AYEBALE CHARITY 20/U/0412 KIRABO PAMELA 20/U/12092/PS KAGO SIMON PETER 20/U/0410
  • 2. • ENTREZ – is a molecular biology database and retrieval system developed by the National Center for Biotechnology Information (NCBI). • It is an entry point for exploring distinct but integrated databases. • Retrieval of huge and ever increasing database is one of the important task for users in bioinformatics. • It provides access to all NCBI databases simultaneously with a single query string and user interface.
  • 3. Background of Entrez • In 1991, Entrez was introduced in CD form. • In 1993, a client-server version of the software provided connectivity with the internet. • In 1994, NCBI established a website, and Entrez was part of this initial release. • In 2001, Entrez bookshelf was release and in 2003, the Entrez Gene database was developed.
  • 4. Features of Entrez • It is a molecular biology database and retrieval system • Entrez also allows Batch downloads of large search results. • Also known as an integrated database and its cross-referenced • It is an entry point for exploring distinct but integrated data bases. • Easy to use and is highly convenient • User don’t have to visit multiple database as it displays all the links of information on single web page • It allows text based search for a wide variety of data , such as annotated genetic sequence information , citations , abstract full papers • It uses Boolean operator
  • 5.
  • 6.
  • 7. How to use Entrez • Open Google /chrome • Type -Entrez • Select Entrez from upper panel • Type any biological gene or protein • Click search
  • 8.
  • 9.
  • 10.
  • 11.
  • 12.
  • 13.
  • 14.
  • 15.
  • 16.
  • 17.
  • 18. Guide video of how to use Entrez.
  • 19. References • Entrez: Molecular Biology Database and Retrieval System, Schuler GD, Epstein JA, Ohkawa H, Kans JA, Methods Enzymol. 266, 141-62, 1996. (http:/www.ncbi.nlm.nih.gov/Entrez/). • vlab.amrita.edu,. (2012). Retrieving sequence data from Entrez. Retrieved 9th March 2024, from vlab.amrita.edu/?sub=3&brch=273&sim=1437&cnt=2.