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Peer Review in Science
What is It, Does it Work, How Should It Evolve?




 Alex J Mitchell, University of Leicester ajm80@le.ac.uk


                                                     October 2008
Background:
About Medical Publishing
Gutenburg publishing, increasing output
Slide Credit: Robert Gorter – Regional Manager Elsevier, 2008
Increase in Scientific Output




             http://www.americanscientist.org/my_amsci/restricted.aspx?act=pdf&id=3263000957901
Publish Publish Publish!




        Tony and Sam were pleased with their output for 2007
Author’s View of What’s Important

                                    Peer-reviewed
100
 90                                 Refs' comments
 80                                 published
 70                                 Referees identified
 60
 50                                 Public commentary on
 40                                 eprints
 30                                 Post-publication public
 20                                 commentary
 10                                 Ability to submit
  0                                 comments
        http://www.alpsp.org/pub5.ppt
Introducing Scientific Peer Review
History, Definition, Types, Manuscript Processing
History of Peer Review
  • “Peer Review” of any type goes back to the
    17th century and beyond; example “The
  • Inquisition of the Holy Roman and Catholic Church”. Scholars’
    works were examined for any hints of “heresy”.

  • The first recorded academic peer review process was at The
    Royal Society in 1665 by the founding editor of Philosophical
    Transactions of the Royal Society, Henry Oldenburg, soon
    followed by “Medical Essays and Observations” published by
    the Royal Society of Edinburgh in 1731.




•Ray Spier (2002), quot;The history of the peer-review processquot;, Trends in Biotechnology 20 (8), p. 357-358 [357].
Definitions
• Peer Review Process (defn from Wikipedia)
   – Peer review (also known as refereeing) is the process of subjecting an
     author's scholarly work, research or ideas to the scrutiny of others who are
     experts in the same field.

   – Peer review requires a willing and able community of experts who give
     impartial feedback, with no personal credit and no financial or other reward.

• Peer Review Journal
   – A peer-reviewed journal is one that has submitted most of its published
     articles for review by experts who are not part of the editorial staff. The
     numbers and kinds of manuscripts sent for review, the number of reviewers,
     the reviewing procedures and the use made of the reviewers’


   –   (International Committee of Medical Journal Editors. Uniform Requirements for Manuscripts submitted to Biomedical
       Journals. 2001 http://www.icmje.org/)
Types of Peer Review
Internal vs External
   An internal review is conducted only by editorial staff
   An external review is conducted by experts in the field


Blind vs Open
    In Blind Peer Review submitted manuscripts are sent outside of the journal’s
       publishing or sponsoring organization for review by external reviewers
       whose identifies are hidden
    In Open Peer Review reviewers disclose their identity. Often authors are
       encouraged to suggest possible reviewers who are may or may not be
       impartial
Examples of Problems with Peer Review
•   Famous papers that were published and did NOT get peer reviewed:
     – Watson & Crick’s 1951 paper on the structure of DNA in Nature
     – Abdus Salam’s paper “Weak and electromagnetic interactions” (1968). Led to Nobel Prize
     – Alan Sokal’s “Transgressing the Boundaries...” in 1996 turned out to be a hoax. Now known as the
       Sokal Affair.
     – Albert Einstein's revolutionary quot;Annus Mirabilisquot; papers in the 1905 issue of Annalen der Physik were
       only reviewed by the editor
•   Famous papers that were published and passed peer review that later proved to be fraudulent:
     – Jan Hendrik Schon (Bell Labs) submitted and passed peer review 15 papers published in Science and
       Nature (1998-2001) found to be fraudulent.
     – Igor and Grichka Bogdanov 1999 & 2002 published papers in theoretical physics believed by many to
       be jargon-rich nonsense.
•   Famous papers that got rejected that later turned out to be seminal works:
     – Krebs & Johnson’s 1937 paper on the role of citric acid on metabolism was rejected by Nature as being
       of “insufficient importance”, was eventually published in the Dutch journal Enzymologia. This
       discovery, now known as the Krebs Cycle, was recognized with a Nobel prize in 1953.
     – Black & Scholes 1973 paper on “the pricing of options and corporate liabilities”, rejected many times,
       was eventually published at the intersession of Merton Miller to get it accepted by the Journal of Political
       Economy. This work led to the Nobel Prize.

                                                                                     Credit: Peggy Dominy & Jay Bhatt
Does it Work? The Issue In a Nutshell
• “Stand at the top of the stairs with a pile of papers and throw them
  down the stairs. Those that reach the bottom are published.”

   => It is not clear to what extent peer review improves the submitted product


• “Sort the papers into two piles: those to be published and those to
  be rejected. Then swap them over!”

   => Peer review is often haphazard and unmonitored




                                        Adapted from Trish Groves: BMJ What Do We Know About Peer Review
Typical Journal Statistics (eg BMJ)
• 6000-7000 research papers received
• About 5-7% accepted
• 1000 rejected by one editor within 48 hours
   – further 3000 rejected with second editor
   – within one week of submission 3000 read by senior editor;
     further 1500 rejected
   – 1500 sent to two reviewers; then 500 more rejected
   – 500 reach weekly manuscript meeting (with Editor, a clinicians
     and a statistician)
   – 350 research articles accepted, usually after revision
• See Over for Detailed Figure
BMJ Manuscript Processing

                                        1000                 Hand written
6000 received
                                    Immediately              Silly mistakes
  per year                            rejected               Wrong journal


                                        2500                Poorly written
5000 scanned by 1
                                     Rejected by            Obvious flaws
      editor
                                        editor               Too Obscure


   2500 sent                        1000 Rejected           Methodological
   for review                       by reviewer /             concerns
                                        editor              Not interesting


                    500 discussed   400 rejected           100 accepted


  1500 sent to      500 discussed   400 rejected           100 accepted
    hanging
  committees
                    500 discussed   400 rejected           100 accepted




                                         Acceptance Rate         300 accepted per year
                                            = 1 in 20            (6 per week + 2 short
                                                                        reports)
Functions/Responsibilities of Peer Review
1. Filtering out incorrect, inadequate & fraudulent work

2. Improving the accuracy and clarity of work that warrants
   acceptance

3. Helping journals deal with high volumes

4. Helping journals deal with multiple publication
These Are NOT Functions of Peer Review
• Deciding whether the paper should be accepted
   – This is the role of the editor
• Improving the spelling and grammar
   – This is the role of the copy-editor
• Improving on the study design
   – This is the role of the author
• Deciding upon the author order
   – This is the role of the authors
• Disseminating the reviewed paper
   – This is not allowed unless the paper is officially in print
Practicalities of Peer Review
Filters, Publication Cycle, Responsibilities, Tips
Overview of Peer Review
Author Filter             Editorial Filter           Peer Review Filter          Outcome



                                                                                  Quantitative
                                                                  Score (1-10)    Grade


                                                 Grading            Accept        Published
Where to               Article
Submit                 Appraisal                                    Revise        Article
                                                                    Reject
                                                Send
                                                elsewhere
                                                                  Comments
                                            Reject                to Author
                Credit: Bradley Hemminger                                         Qualitative
                                                                                  Grade
Conventional Publication Cycle – 12mo
         T0                T+1mo           T+3mo          T+6mo
Step1                 Step 2           Step 3        Step 4
Paper                 Present to       Present at    Submit to
Completed             colleagues       conference    journal
                      (informal PR)


              T+7mo           T+10mo        T+12mo        T+14mo

Step 5                Step 6           Step 7        Step 8
Editor Agrees to      Peer             Revision 1    Peer
Send for Review                                      Review 2
                      Review 1


         T+15mo               T+18mo        T+24mo
Step 9                Step 10          Step 11       Step 12

Revision 2            Proof            Restricted    Readers letters
                                       Publication   (public PR)
Questions before starting to Review
• Expertise:
   – Do I have expertise in the content or methods, or a valuable perspective on
     the issue?

• Potential conflicts :
   – Do I have conflicts of interest that preclude fair and balanced judgments?
   – Do I stand to gain, either financially or personally, from reviewing this
     particular manuscript?
   – Will I be able to hold the main information that I gain from reviewing this
     manuscript confidential until publication?

• Ability to meet deadline
   – Do I have the time to devote to this review and complete it by the date the
     editors requested?


       Peer Review: Integral to Science and Indispensable to Annals 1038 16 December 2003 Annals of Internal Medicine Volume 139 • Number 12
Questions whilst completing the Review
• Does the review address the relevance of the topic to readers?
• Does the review address the manuscript’s importance and novelty and say what
  it adds to existing knowledge?
• Does the review address the validity of the research, pointing out major strengths
  and weaknesses of the methods?
• Does the review address the clarity of presentation?
• Does the review address important missing and/or inaccurate
• information?
• Does the review address the generalizability of findings?
• Does the review address the interpretation of results and stated conclusions?
• Does the review address whether the authors noted and discussed important
  limitations?
• Does the review cite specifics to support criticisms?
• Does the review offer suggestions for improvement?
• Does the review keep nitpicking to a minimum?
• Is the review’s tone balanced?
• Did I declare potential conflicts of interest?
        Peer Review: Integral to Science and Indispensable to Annals 1038 16 December 2003 Annals of Internal Medicine Volume 139 • Number 12
Editor’s Dilemma
• What Happens When Referees Disagree:
  –   (a) the Editor must decide
  –   (b) Option to Use more additional reviews as a tie-breaker
  –   (c) invite authors to reply to a referee's criticisms
  –   (d) an editor may convey communications back and forth
      between authors and a referee

  – Usually however the editor will reject the paper if there is 1x
    negative review unless there is a special reason not to do so.
    This process is not open, and such decisions are often
    unexplained to authors
Tips for Reviewers: 1
•   Be courteous and constructive
•   Your role is advising not deciding
•   Try to suggest improvement no matter what the outcome
•   Maintain confidentiality
•   Don’t review work for those you know well
•   Complete reviews promptly, typically within 4 weeks
•   Spend at least 1 hour on the review
•   Search for related (esp recent work)
•   Write as you would like to be written to
Tips for Reviewers 2 - Key Questions
•   Is the research question Appropriate?
•   Was the question answered?
•   Were the methods appropriate?
•   What must be improved?
•   What could be improved?
•   What were the strengths?
•   Was all relevant literature considered?
•   What will readers think
•   => Would I object if my review was published
Problems with Peer Review
Explicit Rules , Reliability, Bias, Blinding, Plagiarism Detection, Delays
Rules of the Game are Not Explicit
Peters and Ceci (1982)
Resubmitted 12 altered articles to psychology journals that
  had already published them but changed
  title/abstract/introduction/authors’ name/name of
  institution

• 3 articles recognised as resubmissions
• One accepted
• 8 rejected on methdological grounds!
Peters, D.C., & Ceci, S.J. (1982). Peer review practices of psychological journals: The fate of published articles, submitted again. The
                                                                                            Behavioral and Brain Sciences, 5, 187-255.
What’s Wrong with Peer Review?
• For Authors, Peer review:
        –    Usually Unreliable (Idiosyncratic)
        –    Often Unfair (many biases)
        –    Has no gold standard (Unstandarized)
        –    Often provides qualitative comments only

• For Journals, Peer review:
        –    Stifles innovation => encourages group think
        –    Rewards the prominent
        –    Causes unnecessary delay in publication
        –    Is very expensive
        –    Does not detect fraud, duplicate publication etc
Juan Miguel Campanario, quot;Rejecting Nobel class articles and resisting Nobel class discoveriesquot;, cited in Nature, 16 October 2003, Vol 425, Issue 6959, p.645
                         Sophie Petit-Zeman, quot;Trial by peers comes up shortquot; (2003) The Guardian, Thursday January 16, 2003
Inter-Rater Reliability Issues - 1
  • Locke reported inter-observer values ranging from 0.11 to 0.49 for agreement
    between a number of reviewers making recommendations on a consecutive
    series of manuscripts submitted to BMJ
  • Ingelfinger reported Rates of agreement only “moderately better than chance”
    (Kappa = 0.26) with agreement greater for rejection than acceptance
  • Strayhorn and colleagues reported a value of 0.12 (poor agreement) for 268
    manuscripts submitted to the JAACAP (Strayhorn et al., 1993)
  • low levels of agreement were reported by Scharschmidt et al. for papers
    submitted to the Journal of Clinical Investigation (Scharschmidt et al., 1994

  Two reviewers are not enough
  • Fletcher and Fletcher 1999 - need at least six reviewers, all favouring rejection or
    acceptance, to yield a stats significant conclusion (p<0.05)
Ingelfinger FJ. Peer review in biomedical publication. American Journal of Medicine 1974; 56:686-692..
Locke S. A difficult balance: editorial peer review in medicine. London: Nuffield Provincial Hospitals Trust; 1985.
Strayhorn J Jr, McDermott JF Jr, Tanguay P. An intervention to improve the reliability of manuscript reviews for the Journal of the American
Academy of Child and Adolescent Psychiatry. Am J Psychiatry 1993; 150: 947–52.
Scharschmidt BF, DeAmicis A, Bacchetti P, Held MJ. Chance, concurrence and clustering: analysis of reviewers' recommendations on 1000
submissions to the Journal of Clinical Investigation. J Clin Invest 1994; 93: 1877–80.
Inter-Rater Reliability Issues - 2
• Linkov F et al Quality Control of Epidemiological Lectures Online:
  Scientific Evaluation of Peer Review Croat Med J. 2007;48:249-55
Is agreement between reviewers any greater than would be
expected by chance alone?
Brain 2000
• We studied two journals in which
  manuscripts were routinely assessed
  by two reviewers, and two
  conferences in which abstracts were
  routinely scored by multiple
  reviewers.
• Agreement between the reviewers as
  to whether manuscripts should be
  accepted, revised or rejected was not
  significantly greater than that
  expected by chance.

• Editors were very much more likely to publish papers when both reviewers
  recommended acceptance than when they disagreed or recommended rejection
• There was little or no agreement between the reviewers as to the priority


 Rothwell PM & Martyn CN Reproducibility of peer review in clinical neuroscience Is agreement between reviewers any
                            greater than would be expected by chance alone? Brain, Vol. 123, No. 9, 1964-1969, 2000
Reliability of Editors' Subjective Quality Ratings of Peer Reviews
of Manuscripts

•   Objective.— Whether editors' quality ratings of peer reviewers are reliable and how they
    compare with other performance measures.
•   Design.— A 3.5-year prospective observational study.
•   Participants.— All editors and peer reviewers who reviewed at least 3 manuscripts.
•   Main Outcome Measures.— Reviewer quality ratings, individual reviewer rate of
    recommendation for acceptance, congruence between reviewer recommendation and
    editorial decision (decision congruence), and accuracy in reporting flaws in a masked test
    manuscript.
•   Interventions.— Editors rated the quality of each review on a subjective 1 to 5 scale.
•   Results.— A total of 4161 reviews of 973 manuscripts by 395 reviewers were studied.
    The within-reviewer intraclass correlation was 0.44 (P<.001), indicating that 20% of the
    variance seen in the review ratings was attributable to the reviewer. Intraclass correlations
    for editor and manuscript were only 0.24 and 0.12, respectively. Reviewer average quality
    ratings correlated poorly with the rate of recommendation for acceptance (R=-0.34) and
    congruence with editorial decision (R=0.26). Highly rated reviewers reported twice as
    many flaws as poorly rated reviewers.
•   Conclusions.— Subjective editor ratings of individual reviewers were moderately
    reliable and correlated with reviewer ability to report manuscript flaws.



                    Callaham ML et al Reliability of Editors' Subjective Quality Ratings of Peer Reviews of
                    Manuscripts JAMA. 1998;280:229-231.
Bias
Author-related
• Prestige (author/institution)
• Gender
• Where they live and work

Paper-related
• Positive results
• English language
Bias from Hidden Reviewers
          Friend
                                    Enemy



Unknown                    +    -

                                          Revision
                   +       Author
                           Author                              Acceptance


                                    -
   Enemy               -

                                                     Rejection
                               Unknown



                                    See Maddox J. Conflicts of interest declared [news]. Nature 1992; 360: 205;
                                            Locke S. Fraud in medicine [editorial]. Br Med J 1988; 296: 376–7.
Open & Blind Review & Submission
• Does revealing reviewers’ identity influence outcome?
   – Open vs blind peer review


• Does revealing Authors’ identity influence outcome?
   – Open vs blind submission


• Key Studies
“Effect of Blinding and Unmasking on the Quality of
Peer Review A Randomized Trial JAMA” vs Blind Submission
                                      Open

Design and Setting.— Randomized trial of 527 consecutive manuscripts submitted
  to BMJ, which were randomized and each sent to 2 peer reviewers.
• Interventions.— Manuscripts were randomized as to whether the reviewers
  were unmasked, masked, or uninformed that a study was taking place. Two
  reviewers for each manuscript were randomized to receive either a blinded or an
  unblinded version.
• Results.— Of the 527 manuscripts entered into the study, 467 (89%) were
  successfully randomized and followed up. The mean total quality score was 2.87.
  There was little or no difference in review quality between the masked and
  unmasked groups (scores of 2.82 and 2.96, respectively) and between the blinded
  and unblinded groups (scores of 2.87 and 2.90, respectively). There was no
  apparent Hawthorne effect. There was also no significant difference between
  groups in the recommendations regarding publication or time taken to review.
• Conclusions.— Blinding and unmasking made no editorially significant
  difference to review quality, reviewers' recommendations, or time taken to
  review.
             Van Rooyen et al Effect of Blinding and Unmasking on the Quality of Peer Review A Randomized Trial
                                                                                        JAMA. 1998;280:234-237.
“Effect on the quality of peer review of blinding peer
reviewers and asking them to sign their reports”
                                                                        Open vs Blind Submission

•   Objective.— To evaluate the effect on the quality of peer review of blinding reviewers to the
    authors' identities and requiring reviewers to sign their reports.
•   Design.— Randomized controlled trial.
•   Setting.— A general medical journal.
•   Participants.— A total of 420 reviewers from the journal's database.
•   Intervention.— We modified a paper accepted for publication introducing 8 areas of weakness.
    Reviewers were randomly allocated to 5 groups. Groups 1 and 2 received manuscripts from which
    the authors' names and affiliations had been removed, while groups 3 and 4 were aware of the
    authors' identities. Groups 1 and 3 were asked to sign their reports, while groups 2 and 4 were asked
    to return their reports unsigned. The fifth group was sent the paper in the usual manner of the
    journal, with authors' identities revealed and a request to comment anonymously. Group 5 differed
    from group 4 only in that its members were unaware that they were taking part in a study.
•   Main Outcome Measure.— The number of weaknesses in the paper that were commented on by the
    reviewers.
•   Results.— Reports were received from 221 reviewers (53%). The mean number of weaknesses
    commented on was 2 (1.7, 2.1, 1.8, and 1.9 for groups 1, 2, 3, and 4 and 5 combined, respectively).
    There were no statistically significant differences between groups in their performance. Reviewers
    who were blinded to authors' identities were less likely to recommend rejection than those who were
    aware of the authors' identities (odds ratio, 0.5; 95% confidence interval, 0.3-1.0).
•   Conclusions.— Neither blinding reviewers to the authors and origin of the paper nor requiring them
    to sign their reports had any effect on rate of detection of errors. Such measures are unlikely to
    improve the quality of peer review reports

                                                                        Godlee et al JAMA. 1998;280:237-240.
“The effects of blinding on the quality of peer review. A
randomized trial”                        Open vs Blind Submission

• Peer reviewers are blinded sometimes to authors' and institutions' names, but the
  effects of blinding on review quality are not known.

• We, therefore, conducted a randomized trial of blinded peer review. Each of 127
  consecutive manuscripts of original research that were submitted to the Journal
  of General Internal Medicine were sent to two external reviewers, one of whom
  was randomly selected to receive a manuscript with the authors' and institutions'
  names removed.

• Reviewers were asked, but not required, to sign their reviews.
• Blinding was successful for 73% of reviewers.

• Quality of reviews was higher for the blinded manuscripts (3.5 vs 3.1 on a 5-
  point scale). Forty-three percent of reviewers signed their reviews, and blinding
  did not affect the proportion who signed. There was no association between
  signing and quality. Our study shows that, in our setting, blinding improves the
  quality of reviews and that research on the effects of peer review is possible.

                                                  McNutt et al JAMA Vol. 263 No. 10, March 9, 1990
“Does Masking Author Identity Improve Peer Review
Quality? A Randomized Controlled Trial” Open vs Blind Submission
•   Objectives.— To determine whether masking reviewers to author identity is generally associated
    with higher quality of review at biomedical journals, and to determine the success of routine
    masking techniques.
•   Interventions.— Two peers reviewed each manuscript. In one study arm, both peer reviewers
    received the manuscript according to usual masking practice. In the other arm, one reviewer was
    randomized to receive a manuscript with author identity masked, and the other reviewer received an
    unmasked manuscript.
•   Main Outcome Measure.— Review quality on a 5-point Likert scale as judged by manuscript
    author and editor. A difference of 0.5 or greater was considered important.
•   Results.— A total of 118 manuscripts were randomized, 26 to usual practice and 92 to intervention.
    In the intervention arm, editor quality assessment was complete for 77 (84%) of 92 manuscripts.
    Author quality assessment was complete on 40 (54%) of 74 manuscripts. Authors and editors
    perceived no significant difference in quality between masked (mean difference, 0.1; 95%
    confidence interval [CI], -0.2 to 0.4) and unmasked (mean difference, -0.1; 95% CI, -0.5 to 0.4)
    reviews. We also found no difference in the degree to which the review influenced the editorial
    decision (mean difference, -0.1; 95% CI,-0.3 to 0.3). Masking was often unsuccessful (overall, 68%
    successfully masked; 95% CI, 58%-77%), although 1 journal had significantly better masking
    success than others (90% successfully masked; 95% CI, 73%-98%). Manuscripts by generally
    known authors were less likely to be successfully masked (odds ratio, 0.3; 95% CI, 0.1-0.8). When
    analysis was restricted to manuscripts that were successfully masked, review quality as assessed by
    editors and authors still did not differ.
•   Conclusions.— Masking reviewers to author identity as commonly practiced does not improve
    quality of reviews. Since manuscripts of well-known authors are more difficult to mask, and those
    manuscripts may be more likely to benefit from masking, the inability to mask reviewers to the
    identity of well-known authors may have contributed to the lack of effect.
                                                                     Justice et al. JAMA. 1998;280:240-242.
“Differences in Review Quality and Recommendations for
Publication Between Peer Reviewers Suggested by Authors/Editorsquot;
                                                                      Choice vs No-Choice Reviewer

 •   Design, Setting, and Participants Observational study of original research papers sent
     for external review at 10 biomedical journals. Editors were instructed to make decisions
     about their choice of reviewers in their usual manner. Journal administrators then
     requested additional reviews from the author's list of suggestions according to a strict
     protocol.
 •   Main Outcome Measure Review quality using the Review Quality Instrument and the
     proportion of reviewers recommending acceptance (including minor revision), revision,
     or rejection.
 •   Results There were 788 reviews for 329 manuscripts. Review quality (mean difference
     in Review Quality Instrument score, –0.05; P = .27) did not differ significantly between
     author- and editor-suggested reviewers. The author-suggested reviewers were more likely
     to recommend acceptance (odds ratio, output95% confidence interval, 1.02-2.66) or revise
           Gutenburg publishing, increasing 1.64;
     (odds ratio, 2.66; 95% confidence interval, 1.43-4.97). This difference was larger in the
     open reviews of BMJ than among the blinded reviews of other journals for acceptance
     (P = .02). Where author- and editor-suggested reviewers differed in their
     recommendations, the final editorial decision to accept or reject a study was evenly
     balanced (50.9% of decisions consistent with the preferences of the author-suggested
     reviewers).
 •   Conclusions Author- and editor-suggested reviewers did not differ in the quality of their
     reviews, but author-suggested reviewers tended to make more favorable
     recommendations for publication.
                      Schroter JAMA 2006;295:314-317; see also Scharschmidt et al J Clin Invest 1994; 93: 1877–80.
COPE Studies
• Deliberately inserted 8 errors(method, analysis and
  interpretation) into an accepted paper

• sent it to 400 reviewers - 221 responded

• mean number of weaknesses found was 2

• only 10% identified 4 or more

• 16% didn’t detect any                      •Godlee,F et al JAMA,1998,280,237
“Open peer review: a randomised controlled trial”
    Br Journal Psychiatry 2000

    • 408 manuscripts assigned to
      reviewers who agreed were
      randomised to signed or unsigned
      groups.

    • 245 reviewers (76%) agreed to
      sign their name.

    •     Signed reviews were of 5%
         higher quality, more courteous
         and took longer to complete than
         unsigned reviews.

    • They were more likely to
      recommend publication.

Walsh et al (2000) Br Journal Psychiatry 176(1)47-51
van Rooyen BMJ 1999;318:23-27
• 125 eligible papers were sent to two reviewers who were
  randomised to have their identity revealed to the authors or
  to remain anonymous.

• Identified were 12% more likely than anonymous (35% v
  23%) to decline to review the paper.

• There was no significant difference in quality

• No significant difference in the recommendation regarding
  publication or time taken to review the paper.
Problems: Plagarism & Duplicates
• A poll of 3,247 scientists funded by the U.S.
  National Institutes of Health found 0.3% admitted
  faking data, 1.4% admitted plagiarism, and 4.7%
  admitted to autoplagiarism (republishing).[Weiss]

• Note: Reviewers generally lack access to full raw
  data!!

•   Weiss, Rick. 2005. Many scientists admit to misconduct: Degrees of deception vary in poll.
    Washington Post. June 9, 2005. page A03.[1]
Problems: Delays!!
“There was some delay in the peer review due to a backlog in the in-tray”
Credit: Paul.peters@hindawi.com
Speed of Publication




                       Credit: Fiona Godlee
Evidence behind Peer Review
What does the evidence suggest….who judges the judges?
“Effects of Editorial Peer Review: A Systematic
Review”
• 9 studies considered the effects of concealing reviewer/author identity.
    – 4 studies suggested that concealing reviewer or author identity affected review quality
      (mostly positively); however, methodological limitations make their findings
      ambiguous.
• One study suggested that a statistical checklist can improve report quality, but
  another failed to find an effect of publishing another checklist.

• 2 studies of how journals communicate with reviewers did
  not demonstrate any effect on review quality.
• 1 study failed to show reviewer bias.
• 1 nonrandomized study compared the quality of articles
  published in peer-reviewed vs other journals
• Two studies showed that editorial processes make articles
  more readable and improve the quality of reporting


                                                         Jefferson T et al JAMA. 2002;287:2784-2786
Future of Peer Review
Open publication, training, what makes a good reviewer?
Open Publication Cycle – 12 months
         T0                 T+1mo               T+3mo              T+5mo
Step1                  Step 2               Step 3         Step 4
Paper                  Present to           Present at     Submit to
Completed              colleagues           conference     online journal
                       (informal PR)


               T+6mo                T+7mo                          T+9mo

Step 5                 Step 6 Public                       Step 8
                       comments
Editor Publishes                                           Revision
                       Step 7 Peer
“discussion paper”
                       Review 1


              T+11mo                        T+12mo
Step 9                 Step 10                           Step 11

Online proof           Open Access Publication           Readers letters
                                                         (post-publication)
New Models: Case 1




• All submitted articles within scope are immediately posted on the
  Web for a 90 day discussion period
• At end of “review” period, authors given option to revise; revised
  article sent out for “pass-fail” review”
• If “pass,” article is published
New Models: Case 2




• Authors select reviewers from among BD editorial board members
• Reviews published alongside author’s responses as part of article
• Three reviews required
New Models: Case 3
                 • Pre-publication review focuses
                   on technical rather than
                   subjective issues
                 • All published papers made
                   available for community-
                   based open peer review
                   including online annotation,
                   discussion, and rating
                 • Managing Editor, Chris
                   Surridge
Open Access Publishing
    Discussion Forum (Pub. Stage 1) + Journal (Pub. Stage 2)
Publish without a
   Publisher?
Improving Peer Review by Training?
Effects of training on quality of peer review:
randomised controlled trial
• Reviewers in the self taught group scored higher in review quality
  after training than did the control group, but the difference was not
  of editorial significance and was not maintained in the long term.

   – Both intervention groups identified significantly more major errors after
     training than did the control group (3.14 and 2.96 v 2.13; P < 0.001), and this
     remained significant after the reviewers' performance at baseline assessment
     was taken into account.
   – The evidence for benefit of training was no longer apparent on further testing
     six months after the interventions. Training increased likelihood of
     recommending rejection (92% and 84% v 76%; P = 0.002).

• Short training packages have only a slight impact on the quality of
  peer review.
• http://resources.bmj.com/bmj/reviewers/training-materials

                                                           Schroter et al BMJ 2004;328:673
What errors do peer reviewers detect, and does training
improve their ability to detect them?
• Design 607 peer reviewers at the BMJ were randomized to two intervention
  groups receiving different types of training (face-to-face training or a self-taught
  package) and a control group. Each reviewer was sent the same three test papers
  over the study period, each of which had nine major and five minor
  methodological errors inserted.
• Main outcome measures The quality of review, assessed using a validated
  instrument, and the number and type of errors detected before and after training.
• Results The number of major errors detected varied over the three papers. The
  interventions had small effects. At baseline (Paper 1) reviewers found an average
  of 2.58 of the nine major errors, with no notable difference between the groups.
  The mean number of errors reported was similar for the second and third papers,
  2.71 and 3.0, respectively. Biased randomization was the error detected most
  frequently in all three papers, with over 60% of reviewers rejecting the papers
  identifying this error. Reviewers who did not reject the papers found fewer errors
  and the proportion finding biased randomization was less than 40% for each
  paper.
• Conclusions Editors should not assume that reviewers will detect most major
  errors, particularly those concerned with the context of study. Short training
  packages have only a slight impact on improving error detection
                                                           J R Soc Med 2008;101:507-514
What Makes a Good Reviewer?
• A reviewer was less than 40 years old

• From a top academic institution

• Well known to the editor choosing the reviewer

• Author blinded to the identity of the manuscript's authors

• Then the probability of good review was 87% vs 7%
  Evans AT, McNutt RA, Fletcher SW, Fletcher RH. The characteristics of peer reviewers who produce good-quality
                                                                  reviews. J Gen Intern Med. 1993 Aug;8(8):422-8
Why Credit for Reviewing?
• See:

• Leanne Tite, Sara Schroter Why do peer reviewers decline to review? A
  survey Journal of Epidemiology and Community Health 2007;61:9-12;
  doi:10.1136/jech
Richard Horton (editor The Lancet):

• quot;The mistake, of course, is to have thought that peer
  review was any more than a crude means of discovering
  the acceptability — not the validity — of a new finding.
  Editors and scientists alike insist on the pivotal
  importance of peer review. We portray peer review to the
  public as a quasi-sacred process that helps to make
  science our most objective truth teller. But we know that
  the system of peer review is biased, unjust,
  unaccountable, incomplete, easily fixed, often insulting,
  usually ignorant, occasionally foolish, and frequently
  wrong.quot;

                 eMJA: Horton, Genetically modified food: consternation, confusion, and crack-up
Overview of Changes
          Peer Identity   Author (Draft)   Paper in print
                          identity


Past      Hidden          Declared         Declared



Current   Partially       Partial Anony.   Declared
          declared


Future    Declared        Anonymous        Declared
10 Suggestions for Better Peer Review
1.  Make Peer Review part of training (with supervision)
2.  Disclose the identifies of the reviewers
3.  Hide the identities of the authors
4.  Peer review with a minimum of 3 reviewers
5.  Have a quantitative and qualitative element
6.  Allow anyone to comment whilst the article is “online only”
7.  Score every peer review and avoid use of low scorers
8.  Require reviewers to disclose absence of bias & require authors to
    submit full datasets
9. Show the authors the full review on request
10. Publish the peer reviews for every paper (accepted or rejected)
    online
Further Reading
References
•   Smith Peer review: a flawed process at the heart of science and journals.
    JRSM 2006;99:178-182.

•   Linkov et al. Scientific Journals are 'faith based': is there science behind Peer review? JRSM 2006;99:596-598.

•   Schroter et al. What errors do peer reviewers detect, and does training improve their ability to detect them?
    JRSM 2008;101:507-514.

•   Rennie R. Editorial peer review:its development and rationale
•   In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ
    Books, 2003:1-13.

•   Overbeke J, Wager E. The state of evidence: what we know and what we don't know about
    journal peer review In Godlee F, Jefferson T, editors. Peer review in health sciences. Second
    edition. London: BMJ Books, 2003:45-61.

•   Fletcher RH, Fletcher SW. The effectiveness of editorial peer review In Godlee F, Jefferson T,
    editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:62-75.

•   Martyn C. Peer review: some questions from Socrates In Godlee F, Jefferson T, editors. Peer
    review in health sciences. Second edition. London: BMJ Books, 2003:322-8.

•   Smith R. The future of peer review In Godlee F, Jefferson T, editors. Peer review in health
    sciences. Second edition. London: BMJ Books, 2003:329-46.
Appendix
• Checklist for critical appraisal
•   http://ap.psychiatryonline.org/cgi/content/full/28/2/81/A1
Credit: Panayiota Polydoratou and Martin Moyle
Sources
•   1. Kronick DA. Peer-review in 18th-century scientific journalism. JAMA. 1990;263:1321-1322. ABSTRACT 2. Overbeke J. The
    state of the evidence: what we know and what we don't know about journal peer review. In: Godlee F, Jefferson T, eds. Peer Review in
    Health Sciences. London, England: BMJ Books; 1999:32-45. 3. Alderson P, Davidoff F, Jefferson TO, Wager E. Editorial peer
    review for improving the quality of reports of biomedical studies [Protocol for a Cochrane Methodology Review]. Oxford, England:
    Cochrane Library, Update Software; 2001; issue 3. 4. Rennie D. Editorial peer review in biomedical publication. JAMA.
    1990;263:1317. FULL TEXT | ISI | PUBMED 5. Rennie D, Flanagin A. The second International Congress on Peer Review in
    Biomedical Publication. JAMA. 1994;272:91. FULL TEXT | ISI | PUBMED 6. Rennie D, Flanagin A. Congress on Biomedical Peer
    Review. JAMA. 1998;280:213. FREE FULL TEXT 7. Wager E, Middleton P. Effects of technical editing in biomedical journals: a
    systematic review. JAMA. 2002;287:2821-2824. FREE FULL TEXT 8. McNutt RA, Evans AT, Fletcher RH, Fletcher SW. The
    effects of blinding on the quality of peer review. JAMA. 1990;263:1371-1376. ABSTRACT 9. Fisher M, Friedman SB, Strauss B.
    The effects of blinding on acceptance of research papers by peer review. JAMA. 1994;272:143-146. ABSTRACT 10. Jadad AR,
    Moore A, Carroll D, et al. Assessing the quality of reports of randomized clinical trials. Control Clin Trials. 1996;17:1-12. FULL
    TEXT | ISI | PUBMED 11. van Rooyen S, Godlee F, Evans S, et al. Effect of blinding and unmasking on the quality of peer review.
    JAMA. 1998;280:234-237. FREE FULL TEXT 12. Godlee F, Gale CR, Martyn CN. Effect on the quality of peer review of blinding
    peer reviewers and asking them to sign their reports. JAMA. 1998;280:237-240. FREE FULL TEXT 13. Justice AC, Cho MK,
    Winker MA, et al. Does masking author identity improve peer review quality? JAMA. 1998;280:240-242. FREE FULL TEXT 14.
    van Rooyen S, Godlee F, Evans S, et al. Effect of open peer review on quality of reviews and on reviewers' recommendations. BMJ.
    1999;318:23-27. FREE FULL TEXT 15. Das Sinha S, Sahni P, Nundy S. Does exchanging comments of Indian and non-Indian
    reviewers improve the quality of manuscript reviews? Natl Med J India. 1999;12:210-213. PUBMED 16. Walsh E, Rooney M,
    Appleby L, Wilkinson G. Open peer review. Br J Psychiatry. 2000;176:47-51. FREE FULL TEXT 17. Jefferson T, Smith R, Yee Y,
    et al. Evaluating the BMJ guidelines for economic submissions. JAMA. 1998;280:275-277. FREE FULL TEXT 18. Gardner MJ,
    Bond J. An exploratory study of statistical assessment of papers published in the British Medical Journal. JAMA. 1990;263:1355-
    1357. ABSTRACT 19. Bingham CM, Higgins G, Coleman R, Van der Weyden MB. The Medical Journal of Australia Internet peer-
    review study. Lancet. 1998;352:441-445. FULL TEXT | ISI | PUBMED 20. Neuhauser D, Koran CJ. Calling Medical Care reviewers
    first. Med Care. 1989;27:664-666. FULL TEXT | ISI | PUBMED 21. Callaham ML, Wears RL, Waeckerle JF. Effect of attendance at
    a training session on peer reviewer quality and performance. Ann Emerg Med. 1998;32:318-322. FULL TEXT | ISI | PUBMED 22.
    Strayhorn J, McDermott JF Jr, Tanguay P. An intervention to improve the reliability of manuscript reviews for the Journal of the
    American Academy of Child and Adolescent Psychiatry. Am J Psychiatry. 1993;150:947-952. FREE FULL TEXT 23. Ernst E, Resch
    KL. Reviewer bias against the unconventional? Complement Ther Med. 1999;7:19-23. FULL TEXT | PUBMED 24. Elvik R. Are
    road safety evaluation studies published in peer reviewed journals more valid than similar studies not published in peer reviewed
    journals? Accid Anal Prev. 1998;30:101-118. FULL TEXT | ISI | PUBMED 25. Goodman SN, Berlin J, Fletcher SW, Fletcher RH.
    Manuscript quality before and after peer review and editing at Annals of Internal Medicine. Ann Intern Med. 1994;121:11-21. FREE
    FULL TEXT 26. Pierie JP, Walvoort HC, Overbeke AJ. Readers' evaluation of effect of peer review and editing on quality of articles
    in the Nederlands Tijdschrift voor Geneeskunde. Lancet. 1996;348:1480-1483. FULL TEXT | ISI | PUBMED 27. Jefferson T, Wager
    E, Davidoff F. Measuring the quality of editorial peer review. JAMA. 2002;287:2786-2790. FREE FULL TEXT
“That’s it? That’s Peer Review?”

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Online - Exposing Scientific Peer Review (Oct08)

  • 1. Peer Review in Science What is It, Does it Work, How Should It Evolve? Alex J Mitchell, University of Leicester ajm80@le.ac.uk October 2008
  • 2. Background: About Medical Publishing Gutenburg publishing, increasing output
  • 3. Slide Credit: Robert Gorter – Regional Manager Elsevier, 2008
  • 4. Increase in Scientific Output http://www.americanscientist.org/my_amsci/restricted.aspx?act=pdf&id=3263000957901
  • 5. Publish Publish Publish! Tony and Sam were pleased with their output for 2007
  • 6. Author’s View of What’s Important Peer-reviewed 100 90 Refs' comments 80 published 70 Referees identified 60 50 Public commentary on 40 eprints 30 Post-publication public 20 commentary 10 Ability to submit 0 comments http://www.alpsp.org/pub5.ppt
  • 7. Introducing Scientific Peer Review History, Definition, Types, Manuscript Processing
  • 8.
  • 9. History of Peer Review • “Peer Review” of any type goes back to the 17th century and beyond; example “The • Inquisition of the Holy Roman and Catholic Church”. Scholars’ works were examined for any hints of “heresy”. • The first recorded academic peer review process was at The Royal Society in 1665 by the founding editor of Philosophical Transactions of the Royal Society, Henry Oldenburg, soon followed by “Medical Essays and Observations” published by the Royal Society of Edinburgh in 1731. •Ray Spier (2002), quot;The history of the peer-review processquot;, Trends in Biotechnology 20 (8), p. 357-358 [357].
  • 10. Definitions • Peer Review Process (defn from Wikipedia) – Peer review (also known as refereeing) is the process of subjecting an author's scholarly work, research or ideas to the scrutiny of others who are experts in the same field. – Peer review requires a willing and able community of experts who give impartial feedback, with no personal credit and no financial or other reward. • Peer Review Journal – A peer-reviewed journal is one that has submitted most of its published articles for review by experts who are not part of the editorial staff. The numbers and kinds of manuscripts sent for review, the number of reviewers, the reviewing procedures and the use made of the reviewers’ – (International Committee of Medical Journal Editors. Uniform Requirements for Manuscripts submitted to Biomedical Journals. 2001 http://www.icmje.org/)
  • 11. Types of Peer Review Internal vs External An internal review is conducted only by editorial staff An external review is conducted by experts in the field Blind vs Open In Blind Peer Review submitted manuscripts are sent outside of the journal’s publishing or sponsoring organization for review by external reviewers whose identifies are hidden In Open Peer Review reviewers disclose their identity. Often authors are encouraged to suggest possible reviewers who are may or may not be impartial
  • 12. Examples of Problems with Peer Review • Famous papers that were published and did NOT get peer reviewed: – Watson & Crick’s 1951 paper on the structure of DNA in Nature – Abdus Salam’s paper “Weak and electromagnetic interactions” (1968). Led to Nobel Prize – Alan Sokal’s “Transgressing the Boundaries...” in 1996 turned out to be a hoax. Now known as the Sokal Affair. – Albert Einstein's revolutionary quot;Annus Mirabilisquot; papers in the 1905 issue of Annalen der Physik were only reviewed by the editor • Famous papers that were published and passed peer review that later proved to be fraudulent: – Jan Hendrik Schon (Bell Labs) submitted and passed peer review 15 papers published in Science and Nature (1998-2001) found to be fraudulent. – Igor and Grichka Bogdanov 1999 & 2002 published papers in theoretical physics believed by many to be jargon-rich nonsense. • Famous papers that got rejected that later turned out to be seminal works: – Krebs & Johnson’s 1937 paper on the role of citric acid on metabolism was rejected by Nature as being of “insufficient importance”, was eventually published in the Dutch journal Enzymologia. This discovery, now known as the Krebs Cycle, was recognized with a Nobel prize in 1953. – Black & Scholes 1973 paper on “the pricing of options and corporate liabilities”, rejected many times, was eventually published at the intersession of Merton Miller to get it accepted by the Journal of Political Economy. This work led to the Nobel Prize. Credit: Peggy Dominy & Jay Bhatt
  • 13. Does it Work? The Issue In a Nutshell • “Stand at the top of the stairs with a pile of papers and throw them down the stairs. Those that reach the bottom are published.” => It is not clear to what extent peer review improves the submitted product • “Sort the papers into two piles: those to be published and those to be rejected. Then swap them over!” => Peer review is often haphazard and unmonitored Adapted from Trish Groves: BMJ What Do We Know About Peer Review
  • 14. Typical Journal Statistics (eg BMJ) • 6000-7000 research papers received • About 5-7% accepted • 1000 rejected by one editor within 48 hours – further 3000 rejected with second editor – within one week of submission 3000 read by senior editor; further 1500 rejected – 1500 sent to two reviewers; then 500 more rejected – 500 reach weekly manuscript meeting (with Editor, a clinicians and a statistician) – 350 research articles accepted, usually after revision • See Over for Detailed Figure
  • 15. BMJ Manuscript Processing 1000 Hand written 6000 received Immediately Silly mistakes per year rejected Wrong journal 2500 Poorly written 5000 scanned by 1 Rejected by Obvious flaws editor editor Too Obscure 2500 sent 1000 Rejected Methodological for review by reviewer / concerns editor Not interesting 500 discussed 400 rejected 100 accepted 1500 sent to 500 discussed 400 rejected 100 accepted hanging committees 500 discussed 400 rejected 100 accepted Acceptance Rate 300 accepted per year = 1 in 20 (6 per week + 2 short reports)
  • 16. Functions/Responsibilities of Peer Review 1. Filtering out incorrect, inadequate & fraudulent work 2. Improving the accuracy and clarity of work that warrants acceptance 3. Helping journals deal with high volumes 4. Helping journals deal with multiple publication
  • 17. These Are NOT Functions of Peer Review • Deciding whether the paper should be accepted – This is the role of the editor • Improving the spelling and grammar – This is the role of the copy-editor • Improving on the study design – This is the role of the author • Deciding upon the author order – This is the role of the authors • Disseminating the reviewed paper – This is not allowed unless the paper is officially in print
  • 18. Practicalities of Peer Review Filters, Publication Cycle, Responsibilities, Tips
  • 19. Overview of Peer Review Author Filter Editorial Filter Peer Review Filter Outcome Quantitative Score (1-10) Grade Grading Accept Published Where to Article Submit Appraisal Revise Article Reject Send elsewhere Comments Reject to Author Credit: Bradley Hemminger Qualitative Grade
  • 20. Conventional Publication Cycle – 12mo T0 T+1mo T+3mo T+6mo Step1 Step 2 Step 3 Step 4 Paper Present to Present at Submit to Completed colleagues conference journal (informal PR) T+7mo T+10mo T+12mo T+14mo Step 5 Step 6 Step 7 Step 8 Editor Agrees to Peer Revision 1 Peer Send for Review Review 2 Review 1 T+15mo T+18mo T+24mo Step 9 Step 10 Step 11 Step 12 Revision 2 Proof Restricted Readers letters Publication (public PR)
  • 21.
  • 22. Questions before starting to Review • Expertise: – Do I have expertise in the content or methods, or a valuable perspective on the issue? • Potential conflicts : – Do I have conflicts of interest that preclude fair and balanced judgments? – Do I stand to gain, either financially or personally, from reviewing this particular manuscript? – Will I be able to hold the main information that I gain from reviewing this manuscript confidential until publication? • Ability to meet deadline – Do I have the time to devote to this review and complete it by the date the editors requested? Peer Review: Integral to Science and Indispensable to Annals 1038 16 December 2003 Annals of Internal Medicine Volume 139 • Number 12
  • 23. Questions whilst completing the Review • Does the review address the relevance of the topic to readers? • Does the review address the manuscript’s importance and novelty and say what it adds to existing knowledge? • Does the review address the validity of the research, pointing out major strengths and weaknesses of the methods? • Does the review address the clarity of presentation? • Does the review address important missing and/or inaccurate • information? • Does the review address the generalizability of findings? • Does the review address the interpretation of results and stated conclusions? • Does the review address whether the authors noted and discussed important limitations? • Does the review cite specifics to support criticisms? • Does the review offer suggestions for improvement? • Does the review keep nitpicking to a minimum? • Is the review’s tone balanced? • Did I declare potential conflicts of interest? Peer Review: Integral to Science and Indispensable to Annals 1038 16 December 2003 Annals of Internal Medicine Volume 139 • Number 12
  • 24. Editor’s Dilemma • What Happens When Referees Disagree: – (a) the Editor must decide – (b) Option to Use more additional reviews as a tie-breaker – (c) invite authors to reply to a referee's criticisms – (d) an editor may convey communications back and forth between authors and a referee – Usually however the editor will reject the paper if there is 1x negative review unless there is a special reason not to do so. This process is not open, and such decisions are often unexplained to authors
  • 25. Tips for Reviewers: 1 • Be courteous and constructive • Your role is advising not deciding • Try to suggest improvement no matter what the outcome • Maintain confidentiality • Don’t review work for those you know well • Complete reviews promptly, typically within 4 weeks • Spend at least 1 hour on the review • Search for related (esp recent work) • Write as you would like to be written to
  • 26. Tips for Reviewers 2 - Key Questions • Is the research question Appropriate? • Was the question answered? • Were the methods appropriate? • What must be improved? • What could be improved? • What were the strengths? • Was all relevant literature considered? • What will readers think • => Would I object if my review was published
  • 27. Problems with Peer Review Explicit Rules , Reliability, Bias, Blinding, Plagiarism Detection, Delays
  • 28. Rules of the Game are Not Explicit Peters and Ceci (1982) Resubmitted 12 altered articles to psychology journals that had already published them but changed title/abstract/introduction/authors’ name/name of institution • 3 articles recognised as resubmissions • One accepted • 8 rejected on methdological grounds! Peters, D.C., & Ceci, S.J. (1982). Peer review practices of psychological journals: The fate of published articles, submitted again. The Behavioral and Brain Sciences, 5, 187-255.
  • 29. What’s Wrong with Peer Review? • For Authors, Peer review: – Usually Unreliable (Idiosyncratic) – Often Unfair (many biases) – Has no gold standard (Unstandarized) – Often provides qualitative comments only • For Journals, Peer review: – Stifles innovation => encourages group think – Rewards the prominent – Causes unnecessary delay in publication – Is very expensive – Does not detect fraud, duplicate publication etc Juan Miguel Campanario, quot;Rejecting Nobel class articles and resisting Nobel class discoveriesquot;, cited in Nature, 16 October 2003, Vol 425, Issue 6959, p.645 Sophie Petit-Zeman, quot;Trial by peers comes up shortquot; (2003) The Guardian, Thursday January 16, 2003
  • 30. Inter-Rater Reliability Issues - 1 • Locke reported inter-observer values ranging from 0.11 to 0.49 for agreement between a number of reviewers making recommendations on a consecutive series of manuscripts submitted to BMJ • Ingelfinger reported Rates of agreement only “moderately better than chance” (Kappa = 0.26) with agreement greater for rejection than acceptance • Strayhorn and colleagues reported a value of 0.12 (poor agreement) for 268 manuscripts submitted to the JAACAP (Strayhorn et al., 1993) • low levels of agreement were reported by Scharschmidt et al. for papers submitted to the Journal of Clinical Investigation (Scharschmidt et al., 1994 Two reviewers are not enough • Fletcher and Fletcher 1999 - need at least six reviewers, all favouring rejection or acceptance, to yield a stats significant conclusion (p<0.05) Ingelfinger FJ. Peer review in biomedical publication. American Journal of Medicine 1974; 56:686-692.. Locke S. A difficult balance: editorial peer review in medicine. London: Nuffield Provincial Hospitals Trust; 1985. Strayhorn J Jr, McDermott JF Jr, Tanguay P. An intervention to improve the reliability of manuscript reviews for the Journal of the American Academy of Child and Adolescent Psychiatry. Am J Psychiatry 1993; 150: 947–52. Scharschmidt BF, DeAmicis A, Bacchetti P, Held MJ. Chance, concurrence and clustering: analysis of reviewers' recommendations on 1000 submissions to the Journal of Clinical Investigation. J Clin Invest 1994; 93: 1877–80.
  • 31. Inter-Rater Reliability Issues - 2 • Linkov F et al Quality Control of Epidemiological Lectures Online: Scientific Evaluation of Peer Review Croat Med J. 2007;48:249-55
  • 32. Is agreement between reviewers any greater than would be expected by chance alone? Brain 2000 • We studied two journals in which manuscripts were routinely assessed by two reviewers, and two conferences in which abstracts were routinely scored by multiple reviewers. • Agreement between the reviewers as to whether manuscripts should be accepted, revised or rejected was not significantly greater than that expected by chance. • Editors were very much more likely to publish papers when both reviewers recommended acceptance than when they disagreed or recommended rejection • There was little or no agreement between the reviewers as to the priority Rothwell PM & Martyn CN Reproducibility of peer review in clinical neuroscience Is agreement between reviewers any greater than would be expected by chance alone? Brain, Vol. 123, No. 9, 1964-1969, 2000
  • 33. Reliability of Editors' Subjective Quality Ratings of Peer Reviews of Manuscripts • Objective.— Whether editors' quality ratings of peer reviewers are reliable and how they compare with other performance measures. • Design.— A 3.5-year prospective observational study. • Participants.— All editors and peer reviewers who reviewed at least 3 manuscripts. • Main Outcome Measures.— Reviewer quality ratings, individual reviewer rate of recommendation for acceptance, congruence between reviewer recommendation and editorial decision (decision congruence), and accuracy in reporting flaws in a masked test manuscript. • Interventions.— Editors rated the quality of each review on a subjective 1 to 5 scale. • Results.— A total of 4161 reviews of 973 manuscripts by 395 reviewers were studied. The within-reviewer intraclass correlation was 0.44 (P<.001), indicating that 20% of the variance seen in the review ratings was attributable to the reviewer. Intraclass correlations for editor and manuscript were only 0.24 and 0.12, respectively. Reviewer average quality ratings correlated poorly with the rate of recommendation for acceptance (R=-0.34) and congruence with editorial decision (R=0.26). Highly rated reviewers reported twice as many flaws as poorly rated reviewers. • Conclusions.— Subjective editor ratings of individual reviewers were moderately reliable and correlated with reviewer ability to report manuscript flaws. Callaham ML et al Reliability of Editors' Subjective Quality Ratings of Peer Reviews of Manuscripts JAMA. 1998;280:229-231.
  • 34. Bias Author-related • Prestige (author/institution) • Gender • Where they live and work Paper-related • Positive results • English language
  • 35. Bias from Hidden Reviewers Friend Enemy Unknown + - Revision + Author Author Acceptance - Enemy - Rejection Unknown See Maddox J. Conflicts of interest declared [news]. Nature 1992; 360: 205; Locke S. Fraud in medicine [editorial]. Br Med J 1988; 296: 376–7.
  • 36. Open & Blind Review & Submission • Does revealing reviewers’ identity influence outcome? – Open vs blind peer review • Does revealing Authors’ identity influence outcome? – Open vs blind submission • Key Studies
  • 37. “Effect of Blinding and Unmasking on the Quality of Peer Review A Randomized Trial JAMA” vs Blind Submission Open Design and Setting.— Randomized trial of 527 consecutive manuscripts submitted to BMJ, which were randomized and each sent to 2 peer reviewers. • Interventions.— Manuscripts were randomized as to whether the reviewers were unmasked, masked, or uninformed that a study was taking place. Two reviewers for each manuscript were randomized to receive either a blinded or an unblinded version. • Results.— Of the 527 manuscripts entered into the study, 467 (89%) were successfully randomized and followed up. The mean total quality score was 2.87. There was little or no difference in review quality between the masked and unmasked groups (scores of 2.82 and 2.96, respectively) and between the blinded and unblinded groups (scores of 2.87 and 2.90, respectively). There was no apparent Hawthorne effect. There was also no significant difference between groups in the recommendations regarding publication or time taken to review. • Conclusions.— Blinding and unmasking made no editorially significant difference to review quality, reviewers' recommendations, or time taken to review. Van Rooyen et al Effect of Blinding and Unmasking on the Quality of Peer Review A Randomized Trial JAMA. 1998;280:234-237.
  • 38. “Effect on the quality of peer review of blinding peer reviewers and asking them to sign their reports” Open vs Blind Submission • Objective.— To evaluate the effect on the quality of peer review of blinding reviewers to the authors' identities and requiring reviewers to sign their reports. • Design.— Randomized controlled trial. • Setting.— A general medical journal. • Participants.— A total of 420 reviewers from the journal's database. • Intervention.— We modified a paper accepted for publication introducing 8 areas of weakness. Reviewers were randomly allocated to 5 groups. Groups 1 and 2 received manuscripts from which the authors' names and affiliations had been removed, while groups 3 and 4 were aware of the authors' identities. Groups 1 and 3 were asked to sign their reports, while groups 2 and 4 were asked to return their reports unsigned. The fifth group was sent the paper in the usual manner of the journal, with authors' identities revealed and a request to comment anonymously. Group 5 differed from group 4 only in that its members were unaware that they were taking part in a study. • Main Outcome Measure.— The number of weaknesses in the paper that were commented on by the reviewers. • Results.— Reports were received from 221 reviewers (53%). The mean number of weaknesses commented on was 2 (1.7, 2.1, 1.8, and 1.9 for groups 1, 2, 3, and 4 and 5 combined, respectively). There were no statistically significant differences between groups in their performance. Reviewers who were blinded to authors' identities were less likely to recommend rejection than those who were aware of the authors' identities (odds ratio, 0.5; 95% confidence interval, 0.3-1.0). • Conclusions.— Neither blinding reviewers to the authors and origin of the paper nor requiring them to sign their reports had any effect on rate of detection of errors. Such measures are unlikely to improve the quality of peer review reports Godlee et al JAMA. 1998;280:237-240.
  • 39. “The effects of blinding on the quality of peer review. A randomized trial” Open vs Blind Submission • Peer reviewers are blinded sometimes to authors' and institutions' names, but the effects of blinding on review quality are not known. • We, therefore, conducted a randomized trial of blinded peer review. Each of 127 consecutive manuscripts of original research that were submitted to the Journal of General Internal Medicine were sent to two external reviewers, one of whom was randomly selected to receive a manuscript with the authors' and institutions' names removed. • Reviewers were asked, but not required, to sign their reviews. • Blinding was successful for 73% of reviewers. • Quality of reviews was higher for the blinded manuscripts (3.5 vs 3.1 on a 5- point scale). Forty-three percent of reviewers signed their reviews, and blinding did not affect the proportion who signed. There was no association between signing and quality. Our study shows that, in our setting, blinding improves the quality of reviews and that research on the effects of peer review is possible. McNutt et al JAMA Vol. 263 No. 10, March 9, 1990
  • 40. “Does Masking Author Identity Improve Peer Review Quality? A Randomized Controlled Trial” Open vs Blind Submission • Objectives.— To determine whether masking reviewers to author identity is generally associated with higher quality of review at biomedical journals, and to determine the success of routine masking techniques. • Interventions.— Two peers reviewed each manuscript. In one study arm, both peer reviewers received the manuscript according to usual masking practice. In the other arm, one reviewer was randomized to receive a manuscript with author identity masked, and the other reviewer received an unmasked manuscript. • Main Outcome Measure.— Review quality on a 5-point Likert scale as judged by manuscript author and editor. A difference of 0.5 or greater was considered important. • Results.— A total of 118 manuscripts were randomized, 26 to usual practice and 92 to intervention. In the intervention arm, editor quality assessment was complete for 77 (84%) of 92 manuscripts. Author quality assessment was complete on 40 (54%) of 74 manuscripts. Authors and editors perceived no significant difference in quality between masked (mean difference, 0.1; 95% confidence interval [CI], -0.2 to 0.4) and unmasked (mean difference, -0.1; 95% CI, -0.5 to 0.4) reviews. We also found no difference in the degree to which the review influenced the editorial decision (mean difference, -0.1; 95% CI,-0.3 to 0.3). Masking was often unsuccessful (overall, 68% successfully masked; 95% CI, 58%-77%), although 1 journal had significantly better masking success than others (90% successfully masked; 95% CI, 73%-98%). Manuscripts by generally known authors were less likely to be successfully masked (odds ratio, 0.3; 95% CI, 0.1-0.8). When analysis was restricted to manuscripts that were successfully masked, review quality as assessed by editors and authors still did not differ. • Conclusions.— Masking reviewers to author identity as commonly practiced does not improve quality of reviews. Since manuscripts of well-known authors are more difficult to mask, and those manuscripts may be more likely to benefit from masking, the inability to mask reviewers to the identity of well-known authors may have contributed to the lack of effect. Justice et al. JAMA. 1998;280:240-242.
  • 41. “Differences in Review Quality and Recommendations for Publication Between Peer Reviewers Suggested by Authors/Editorsquot; Choice vs No-Choice Reviewer • Design, Setting, and Participants Observational study of original research papers sent for external review at 10 biomedical journals. Editors were instructed to make decisions about their choice of reviewers in their usual manner. Journal administrators then requested additional reviews from the author's list of suggestions according to a strict protocol. • Main Outcome Measure Review quality using the Review Quality Instrument and the proportion of reviewers recommending acceptance (including minor revision), revision, or rejection. • Results There were 788 reviews for 329 manuscripts. Review quality (mean difference in Review Quality Instrument score, –0.05; P = .27) did not differ significantly between author- and editor-suggested reviewers. The author-suggested reviewers were more likely to recommend acceptance (odds ratio, output95% confidence interval, 1.02-2.66) or revise Gutenburg publishing, increasing 1.64; (odds ratio, 2.66; 95% confidence interval, 1.43-4.97). This difference was larger in the open reviews of BMJ than among the blinded reviews of other journals for acceptance (P = .02). Where author- and editor-suggested reviewers differed in their recommendations, the final editorial decision to accept or reject a study was evenly balanced (50.9% of decisions consistent with the preferences of the author-suggested reviewers). • Conclusions Author- and editor-suggested reviewers did not differ in the quality of their reviews, but author-suggested reviewers tended to make more favorable recommendations for publication. Schroter JAMA 2006;295:314-317; see also Scharschmidt et al J Clin Invest 1994; 93: 1877–80.
  • 42. COPE Studies • Deliberately inserted 8 errors(method, analysis and interpretation) into an accepted paper • sent it to 400 reviewers - 221 responded • mean number of weaknesses found was 2 • only 10% identified 4 or more • 16% didn’t detect any •Godlee,F et al JAMA,1998,280,237
  • 43. “Open peer review: a randomised controlled trial” Br Journal Psychiatry 2000 • 408 manuscripts assigned to reviewers who agreed were randomised to signed or unsigned groups. • 245 reviewers (76%) agreed to sign their name. • Signed reviews were of 5% higher quality, more courteous and took longer to complete than unsigned reviews. • They were more likely to recommend publication. Walsh et al (2000) Br Journal Psychiatry 176(1)47-51
  • 44. van Rooyen BMJ 1999;318:23-27 • 125 eligible papers were sent to two reviewers who were randomised to have their identity revealed to the authors or to remain anonymous. • Identified were 12% more likely than anonymous (35% v 23%) to decline to review the paper. • There was no significant difference in quality • No significant difference in the recommendation regarding publication or time taken to review the paper.
  • 45. Problems: Plagarism & Duplicates • A poll of 3,247 scientists funded by the U.S. National Institutes of Health found 0.3% admitted faking data, 1.4% admitted plagiarism, and 4.7% admitted to autoplagiarism (republishing).[Weiss] • Note: Reviewers generally lack access to full raw data!! • Weiss, Rick. 2005. Many scientists admit to misconduct: Degrees of deception vary in poll. Washington Post. June 9, 2005. page A03.[1]
  • 47. “There was some delay in the peer review due to a backlog in the in-tray”
  • 49. Speed of Publication Credit: Fiona Godlee
  • 50. Evidence behind Peer Review What does the evidence suggest….who judges the judges?
  • 51. “Effects of Editorial Peer Review: A Systematic Review” • 9 studies considered the effects of concealing reviewer/author identity. – 4 studies suggested that concealing reviewer or author identity affected review quality (mostly positively); however, methodological limitations make their findings ambiguous. • One study suggested that a statistical checklist can improve report quality, but another failed to find an effect of publishing another checklist. • 2 studies of how journals communicate with reviewers did not demonstrate any effect on review quality. • 1 study failed to show reviewer bias. • 1 nonrandomized study compared the quality of articles published in peer-reviewed vs other journals • Two studies showed that editorial processes make articles more readable and improve the quality of reporting Jefferson T et al JAMA. 2002;287:2784-2786
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  • 55. Future of Peer Review Open publication, training, what makes a good reviewer?
  • 56. Open Publication Cycle – 12 months T0 T+1mo T+3mo T+5mo Step1 Step 2 Step 3 Step 4 Paper Present to Present at Submit to Completed colleagues conference online journal (informal PR) T+6mo T+7mo T+9mo Step 5 Step 6 Public Step 8 comments Editor Publishes Revision Step 7 Peer “discussion paper” Review 1 T+11mo T+12mo Step 9 Step 10 Step 11 Online proof Open Access Publication Readers letters (post-publication)
  • 57. New Models: Case 1 • All submitted articles within scope are immediately posted on the Web for a 90 day discussion period • At end of “review” period, authors given option to revise; revised article sent out for “pass-fail” review” • If “pass,” article is published
  • 58. New Models: Case 2 • Authors select reviewers from among BD editorial board members • Reviews published alongside author’s responses as part of article • Three reviews required
  • 59. New Models: Case 3 • Pre-publication review focuses on technical rather than subjective issues • All published papers made available for community- based open peer review including online annotation, discussion, and rating • Managing Editor, Chris Surridge
  • 60. Open Access Publishing Discussion Forum (Pub. Stage 1) + Journal (Pub. Stage 2)
  • 61. Publish without a Publisher?
  • 62. Improving Peer Review by Training?
  • 63. Effects of training on quality of peer review: randomised controlled trial • Reviewers in the self taught group scored higher in review quality after training than did the control group, but the difference was not of editorial significance and was not maintained in the long term. – Both intervention groups identified significantly more major errors after training than did the control group (3.14 and 2.96 v 2.13; P < 0.001), and this remained significant after the reviewers' performance at baseline assessment was taken into account. – The evidence for benefit of training was no longer apparent on further testing six months after the interventions. Training increased likelihood of recommending rejection (92% and 84% v 76%; P = 0.002). • Short training packages have only a slight impact on the quality of peer review. • http://resources.bmj.com/bmj/reviewers/training-materials Schroter et al BMJ 2004;328:673
  • 64. What errors do peer reviewers detect, and does training improve their ability to detect them? • Design 607 peer reviewers at the BMJ were randomized to two intervention groups receiving different types of training (face-to-face training or a self-taught package) and a control group. Each reviewer was sent the same three test papers over the study period, each of which had nine major and five minor methodological errors inserted. • Main outcome measures The quality of review, assessed using a validated instrument, and the number and type of errors detected before and after training. • Results The number of major errors detected varied over the three papers. The interventions had small effects. At baseline (Paper 1) reviewers found an average of 2.58 of the nine major errors, with no notable difference between the groups. The mean number of errors reported was similar for the second and third papers, 2.71 and 3.0, respectively. Biased randomization was the error detected most frequently in all three papers, with over 60% of reviewers rejecting the papers identifying this error. Reviewers who did not reject the papers found fewer errors and the proportion finding biased randomization was less than 40% for each paper. • Conclusions Editors should not assume that reviewers will detect most major errors, particularly those concerned with the context of study. Short training packages have only a slight impact on improving error detection J R Soc Med 2008;101:507-514
  • 65. What Makes a Good Reviewer? • A reviewer was less than 40 years old • From a top academic institution • Well known to the editor choosing the reviewer • Author blinded to the identity of the manuscript's authors • Then the probability of good review was 87% vs 7% Evans AT, McNutt RA, Fletcher SW, Fletcher RH. The characteristics of peer reviewers who produce good-quality reviews. J Gen Intern Med. 1993 Aug;8(8):422-8
  • 66. Why Credit for Reviewing? • See: • Leanne Tite, Sara Schroter Why do peer reviewers decline to review? A survey Journal of Epidemiology and Community Health 2007;61:9-12; doi:10.1136/jech
  • 67.
  • 68. Richard Horton (editor The Lancet): • quot;The mistake, of course, is to have thought that peer review was any more than a crude means of discovering the acceptability — not the validity — of a new finding. Editors and scientists alike insist on the pivotal importance of peer review. We portray peer review to the public as a quasi-sacred process that helps to make science our most objective truth teller. But we know that the system of peer review is biased, unjust, unaccountable, incomplete, easily fixed, often insulting, usually ignorant, occasionally foolish, and frequently wrong.quot; eMJA: Horton, Genetically modified food: consternation, confusion, and crack-up
  • 69. Overview of Changes Peer Identity Author (Draft) Paper in print identity Past Hidden Declared Declared Current Partially Partial Anony. Declared declared Future Declared Anonymous Declared
  • 70. 10 Suggestions for Better Peer Review 1. Make Peer Review part of training (with supervision) 2. Disclose the identifies of the reviewers 3. Hide the identities of the authors 4. Peer review with a minimum of 3 reviewers 5. Have a quantitative and qualitative element 6. Allow anyone to comment whilst the article is “online only” 7. Score every peer review and avoid use of low scorers 8. Require reviewers to disclose absence of bias & require authors to submit full datasets 9. Show the authors the full review on request 10. Publish the peer reviews for every paper (accepted or rejected) online
  • 72. References • Smith Peer review: a flawed process at the heart of science and journals. JRSM 2006;99:178-182. • Linkov et al. Scientific Journals are 'faith based': is there science behind Peer review? JRSM 2006;99:596-598. • Schroter et al. What errors do peer reviewers detect, and does training improve their ability to detect them? JRSM 2008;101:507-514. • Rennie R. Editorial peer review:its development and rationale • In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:1-13. • Overbeke J, Wager E. The state of evidence: what we know and what we don't know about journal peer review In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:45-61. • Fletcher RH, Fletcher SW. The effectiveness of editorial peer review In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:62-75. • Martyn C. Peer review: some questions from Socrates In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:322-8. • Smith R. The future of peer review In Godlee F, Jefferson T, editors. Peer review in health sciences. Second edition. London: BMJ Books, 2003:329-46.
  • 73. Appendix • Checklist for critical appraisal • http://ap.psychiatryonline.org/cgi/content/full/28/2/81/A1
  • 74. Credit: Panayiota Polydoratou and Martin Moyle
  • 75. Sources • 1. Kronick DA. Peer-review in 18th-century scientific journalism. JAMA. 1990;263:1321-1322. ABSTRACT 2. Overbeke J. The state of the evidence: what we know and what we don't know about journal peer review. In: Godlee F, Jefferson T, eds. Peer Review in Health Sciences. London, England: BMJ Books; 1999:32-45. 3. Alderson P, Davidoff F, Jefferson TO, Wager E. Editorial peer review for improving the quality of reports of biomedical studies [Protocol for a Cochrane Methodology Review]. Oxford, England: Cochrane Library, Update Software; 2001; issue 3. 4. Rennie D. Editorial peer review in biomedical publication. JAMA. 1990;263:1317. FULL TEXT | ISI | PUBMED 5. Rennie D, Flanagin A. The second International Congress on Peer Review in Biomedical Publication. JAMA. 1994;272:91. FULL TEXT | ISI | PUBMED 6. Rennie D, Flanagin A. Congress on Biomedical Peer Review. JAMA. 1998;280:213. FREE FULL TEXT 7. Wager E, Middleton P. Effects of technical editing in biomedical journals: a systematic review. JAMA. 2002;287:2821-2824. FREE FULL TEXT 8. McNutt RA, Evans AT, Fletcher RH, Fletcher SW. The effects of blinding on the quality of peer review. JAMA. 1990;263:1371-1376. ABSTRACT 9. Fisher M, Friedman SB, Strauss B. The effects of blinding on acceptance of research papers by peer review. JAMA. 1994;272:143-146. ABSTRACT 10. Jadad AR, Moore A, Carroll D, et al. Assessing the quality of reports of randomized clinical trials. Control Clin Trials. 1996;17:1-12. FULL TEXT | ISI | PUBMED 11. van Rooyen S, Godlee F, Evans S, et al. Effect of blinding and unmasking on the quality of peer review. JAMA. 1998;280:234-237. FREE FULL TEXT 12. Godlee F, Gale CR, Martyn CN. Effect on the quality of peer review of blinding peer reviewers and asking them to sign their reports. JAMA. 1998;280:237-240. FREE FULL TEXT 13. Justice AC, Cho MK, Winker MA, et al. Does masking author identity improve peer review quality? JAMA. 1998;280:240-242. FREE FULL TEXT 14. van Rooyen S, Godlee F, Evans S, et al. Effect of open peer review on quality of reviews and on reviewers' recommendations. BMJ. 1999;318:23-27. FREE FULL TEXT 15. Das Sinha S, Sahni P, Nundy S. Does exchanging comments of Indian and non-Indian reviewers improve the quality of manuscript reviews? Natl Med J India. 1999;12:210-213. PUBMED 16. Walsh E, Rooney M, Appleby L, Wilkinson G. Open peer review. Br J Psychiatry. 2000;176:47-51. FREE FULL TEXT 17. Jefferson T, Smith R, Yee Y, et al. Evaluating the BMJ guidelines for economic submissions. JAMA. 1998;280:275-277. FREE FULL TEXT 18. Gardner MJ, Bond J. An exploratory study of statistical assessment of papers published in the British Medical Journal. JAMA. 1990;263:1355- 1357. ABSTRACT 19. Bingham CM, Higgins G, Coleman R, Van der Weyden MB. The Medical Journal of Australia Internet peer- review study. Lancet. 1998;352:441-445. FULL TEXT | ISI | PUBMED 20. Neuhauser D, Koran CJ. Calling Medical Care reviewers first. Med Care. 1989;27:664-666. FULL TEXT | ISI | PUBMED 21. Callaham ML, Wears RL, Waeckerle JF. Effect of attendance at a training session on peer reviewer quality and performance. Ann Emerg Med. 1998;32:318-322. FULL TEXT | ISI | PUBMED 22. Strayhorn J, McDermott JF Jr, Tanguay P. An intervention to improve the reliability of manuscript reviews for the Journal of the American Academy of Child and Adolescent Psychiatry. Am J Psychiatry. 1993;150:947-952. FREE FULL TEXT 23. Ernst E, Resch KL. Reviewer bias against the unconventional? Complement Ther Med. 1999;7:19-23. FULL TEXT | PUBMED 24. Elvik R. Are road safety evaluation studies published in peer reviewed journals more valid than similar studies not published in peer reviewed journals? Accid Anal Prev. 1998;30:101-118. FULL TEXT | ISI | PUBMED 25. Goodman SN, Berlin J, Fletcher SW, Fletcher RH. Manuscript quality before and after peer review and editing at Annals of Internal Medicine. Ann Intern Med. 1994;121:11-21. FREE FULL TEXT 26. Pierie JP, Walvoort HC, Overbeke AJ. Readers' evaluation of effect of peer review and editing on quality of articles in the Nederlands Tijdschrift voor Geneeskunde. Lancet. 1996;348:1480-1483. FULL TEXT | ISI | PUBMED 27. Jefferson T, Wager E, Davidoff F. Measuring the quality of editorial peer review. JAMA. 2002;287:2786-2790. FREE FULL TEXT