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TRANSCRIPTION in
PROKARYOTES
MOLECULAR BIOLOGY
Presented by JAHNVEE
PANDEY
What is TRANSCRIPTION ?
 Transcription is the process of copying a
segment of DNA into RNA.
 The segments of DNA transcribed into
RNA molecules that can encode proteins
are said to produce messenger RNA
(mRNA).
 Transcription in prokaryotes takes place in
cytoplasm.
Prokaryotic gene structure
 5’ region of promotor sequence Is called
upstream sequence w r.t to coding sequence.
 3’ region of termination sequence is called
downstream sequence w.r t codinf sequence.
 RNA polymerase binds at promotor sequence.
 RNA coding sequence is the portion to be
copied to form RNA
 Termination region where transcription stops .
Promotor sequence
 Promotor sequence (E.coli)::
 5’-TTGACA-3’ (pribnow box) @ -10
sequence.
 5’-TATAAT-3’ (tata box) @ -35 sequence.
 Signa factor binds to promotor sequence.
RNA polymerase
 It is a holoenzyme.
 Core enzyme + alhpha subunit = RNA
polymerase.
 Core enzyme =2 alpha+beta+beta
prime+omega .
Transcription process
 Transcription process includes 3 steps ::
1. Initiation
 Sigma factor binds to the promotor
region(-10,-35) sequence.
 Core enzyme binds with sigma factor and
promotor sequence but dna is still
closed.This is called closed promotor
complex.
 Then holoenzyme unwinds the dna
Strands.Now this unwinded promotor is
called open promotor complex.
 RNA polymerase gets bind with promotor
at -10 to start transcribing.
 Sigma fator is released so that the RNA
polymerase can go forward.
2.Elongation
 RNA polymerase moves along transcribing
DNA sequence into single stranded RNA
of coding gene.
 When transcribing RNA polymerase
interact with DNA sequence forming
transcription bubble.
 DNA helix recoiled as RNA pol moves
forward.
 Single RNA strand gets out of the RNA
polymerase .
3.Termination
 Rho-independent termination.
 Formation of hairpin structure in growing
trascript by complementary base pairing .
 Include GC rich inverted repeates to form
U- rich tegion(7-9 nucleotides).
 Resulting RNA 3’end lost from active
site,RNA polymerase can’t move forward
and transcription ends.
Rho-dependent termination
 Termination requires activity of protein
called Rho,whichshow rna-dependent atp
activity.
 Rho factor binds to RNA at rut site and
translocates along RNA in 5’ to 3’
direction untill it reaches RNA-DNA hybrid
in RNA polymerase.
 There it releasesthe RNA from DNA and
termination stops.
 Rut site is rich in C residues and poor in G
residues.
Conclusion
 Transcription in prokaryotes takes place in cytoplasm.
 Transcription is coping gene from dna to rna
 Structural gene have promotor ,coding,and termination region.
 Transcription have 3 steps—intiation ,elongation and termination stages .
Thank you

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Transcription in Prokaryotes

  • 2. What is TRANSCRIPTION ?  Transcription is the process of copying a segment of DNA into RNA.  The segments of DNA transcribed into RNA molecules that can encode proteins are said to produce messenger RNA (mRNA).  Transcription in prokaryotes takes place in cytoplasm.
  • 3. Prokaryotic gene structure  5’ region of promotor sequence Is called upstream sequence w r.t to coding sequence.  3’ region of termination sequence is called downstream sequence w.r t codinf sequence.  RNA polymerase binds at promotor sequence.  RNA coding sequence is the portion to be copied to form RNA  Termination region where transcription stops .
  • 4. Promotor sequence  Promotor sequence (E.coli)::  5’-TTGACA-3’ (pribnow box) @ -10 sequence.  5’-TATAAT-3’ (tata box) @ -35 sequence.  Signa factor binds to promotor sequence.
  • 5. RNA polymerase  It is a holoenzyme.  Core enzyme + alhpha subunit = RNA polymerase.  Core enzyme =2 alpha+beta+beta prime+omega .
  • 6. Transcription process  Transcription process includes 3 steps ::
  • 7. 1. Initiation  Sigma factor binds to the promotor region(-10,-35) sequence.  Core enzyme binds with sigma factor and promotor sequence but dna is still closed.This is called closed promotor complex.  Then holoenzyme unwinds the dna Strands.Now this unwinded promotor is called open promotor complex.
  • 8.  RNA polymerase gets bind with promotor at -10 to start transcribing.  Sigma fator is released so that the RNA polymerase can go forward.
  • 9. 2.Elongation  RNA polymerase moves along transcribing DNA sequence into single stranded RNA of coding gene.  When transcribing RNA polymerase interact with DNA sequence forming transcription bubble.  DNA helix recoiled as RNA pol moves forward.  Single RNA strand gets out of the RNA polymerase .
  • 10. 3.Termination  Rho-independent termination.  Formation of hairpin structure in growing trascript by complementary base pairing .  Include GC rich inverted repeates to form U- rich tegion(7-9 nucleotides).  Resulting RNA 3’end lost from active site,RNA polymerase can’t move forward and transcription ends.
  • 11. Rho-dependent termination  Termination requires activity of protein called Rho,whichshow rna-dependent atp activity.  Rho factor binds to RNA at rut site and translocates along RNA in 5’ to 3’ direction untill it reaches RNA-DNA hybrid in RNA polymerase.  There it releasesthe RNA from DNA and termination stops.  Rut site is rich in C residues and poor in G residues.
  • 12. Conclusion  Transcription in prokaryotes takes place in cytoplasm.  Transcription is coping gene from dna to rna  Structural gene have promotor ,coding,and termination region.  Transcription have 3 steps—intiation ,elongation and termination stages .