SlideShare a Scribd company logo
1 of 24
Download to read offline
Dealing with heterogeneous data to improve our
knowledge of biodiversity dynamics and
ecosystem function: perspectives from
synthesis projects.
Saturniid and sphingid moths as novel models for
the study of insect diversity and macroecology
Liliana Ballesteros-Mejia and the ACTIAS
consortium
2
Conservation policies are largely derived from vertebrate and plant data
Kreft & Jetz (2007). Global patterns and determinants
of vasculat plant diversity. PNAS 104
Jenkins et al. (2013). Global patterns of terrestrial
vertebrate diversity and conservation. PNAS 110
Introduction
3
Conservation policies are largely derived from vertebrate and plant data
Jenkins et al. (2013). Global patterns of terrestrial
vertebrate diversity and conservation. PNAS 110
Insects	make	up	for	~	50%	of	species	worldwide	and	play	important	ecological	role.	Affected	by	
climate	change	and	habitat	disturbance	
Introduction
Introduction
4
Cardoso et al. (2011).
Biol. Cons. 144
Beck et al. (2012). Ecography 35
There are important knowledge shortfalls that hinder our
understanding of insect biodiversity
•  Linnean shortfall (Number of sp)
•  Wallacean shortfall (Distribution of sp)
•  Darwinian shortfall ( Evolution)
•  Raunkiaerian shortfall (Sp traits and ecological functions)
Hortal et al. (2015). Annu Rev. Ecol. Evol Syst. 46
Misof et al. (2014). Science 346
Condamine et al. (2012). Ecology letters 15
Taxonomy
Phylogeny
Biogeography
How to address the shortfalls?
Life history & traits
Jean-Yves
Rasplus
Jérôme
Murienne Jan Beck
Sébastien
Lavergne
Ian
Kitching
Stuart
Pimm
Carlos
Lopez-
Vaamonde
Rodolphe
Rougerie
Sujeevan
Ratnasingham
Hélène
Morlon
Thibaud
Decaëns
Paul
Hebert
How to address the shortfalls?
7
Ø  Intermediate species richness (ca. 5000 sp.)
Ø  Global distribution
Ø  Very popular among collectors, many records!
Ø  Molecular phylogeny is well resolved at higher
levels
Ø  Thoroughly documented through DNA barcode
libraries
Saturniid & sphingids moths as new models
Langia
Ambulyx
Hemaris
Proserpinus
Sphingidae
§  4 sub-families §  14 tribes
§  205 genera
Macroglossinae
(1200 sp)
Sphinginae
(400 sp)
Langinae
(1 sp)
1602 species & ssp
Smerinthinae
(600 sp)
Ceratocampinae
(250 sp)
Copiopteryx
Saturniidae
3454 species & ssp
§  8 sub-families §  15 tribes
§  180 genera
Arsenurinae
(90 sp)
Cercophanina
e
(25 sp)
Hemileucinae
(1700 sp)
Saturniinae
(1500 sp)
Agliinae
(5 sp)
Oxyteninae
(70 sp)
Salassinae
(30 sp)
Saturniid & sphingids moths as new models
•  Most species do not feed when
adults
•  Relatively low flying capacities
•  Short adult lifespan
•  Mostly Generalist caterpillars
•  Sexual dimorphism
•  Wide spectrum in feeding
habits
•  High flying capacities
•  Longer adult lifespan
•  Mostly specialist caterpillars
•  Low sexual dimorphism
Saturniidae Sphingidae
Saturniid & sphingids moths as new models
Making sense of complex data!
11
Making sense of complex data
ACTIAS
database
Data compilation
(e.g. Lemaire collection, MNHN,
trait annotation)
Data aggregation
(e.g. Ballesteros et al. 2016; GBIF)
First time for insects
Distribution records
Saturniidae:	95	410	records	(48	391	with	barcodes)	
Sphingidae:	185	867	records	(29	251	with	barcodes)	
Taxonomy / checklist
Kitching et al. (2018) BDJ 6: e22236
10 353 names listed for both families
Sphingidae: 205 genera, 1602 sp. & ssp.
(+250 sp. in past 10 years)
Saturniidae: 180 genera, 3454 sp. & ssp.
(+1500 sp. in past 10 years)
Tackling	Linnean	&	Wallacean	shor8alls	
Making sense of complex data
ACTIAS
database
ACTIAS_OTU
Designing and implementation of a dedicated workflow for data curation
Nomenclature and
Geography
Making sense of complex data
Taxonomic
Reconciliation
Conceptual Workflow
TRAITS
Tackling	Raunkiaerian	shor8all	
ACTIAS
database
Making sense of complex data
Understanding some patterns
The most obvious question and yet the most
elusive answer!
Taxonomical descriptions are not as fashionable anymore (early 20th
century).
A combination of molecular information (i.e. DNA barcodes) and
integrative taxonomy is changing lately the taxonomy of insects. It has
also revealed many cryptic species (most of them in the tropics)
Recent inflation in species number: Sat 1500sp ; Sph 250sp (many
waiting to be described!)
Great wealth of barcodes data after 10 years sampling ready to be
used.
Estimating species richness from barcodes
Does it correlate with previously published
estimates?
Tropics
Observed richness at 200km cell-size
Saturniidae Sphingidae
Number of records 93% (43333) 85% (22404)
Number of BINS 96% (3995) 94% (1829)
UNDERSTANDING PATTERNS
BIN = Barcode Index Number, as proxy for species
How many species are there in the tropics
Sat (Obs)
257
1
Sph (Obs)
150
1
Using DNA BARCODES: Balance between more accurate
account of species diversity vs more limited sample size (30%)
UNDERSTANDING PATTERNS
Cell
size
Saturniidae (#
Cells)
Sphingidae (#
Cells)
Tropics With
data
25rec Tropics With
data
25rec
200 1272 702 236 1272 679 147
Chao1 estimators at 200km cell-size
Used as response variable
Sat (Chao)
408
6
Sph (Chao)
174
4
From these results, we fit multivariate models to identify
the environmental predictors of species richness
Estimating species richness in the tropics
SatChao(env)
484.4
9.6
4	
9	
484	
	
332	
	
Neotropics as the richest for the two families.
Andean part in South America, Venezuelan
Amazonia, Lowland of Peru.
In the Afrotropics: East arc Mountains,
Highlands of Cameroon, Forest areas of
Guinea and Sierra Leone, Madagascar.
In the Asian tropics: Indo-Burma Hotspot,
Sumatra, Borneo, Papua and New Guinea.
UNDERSTANDING PATTERNS
Log10Schao N= 236 cells. (Pseudo-R
2
= 0.742)
Tropics
Log10Schao N= 147 cells. (Pseudo-R
2
= 0.45)
UNDERSTANDING PATTERNS
Macroecological	analyses:	distribuBon	of	species	ranges	
Saturniids	have	smaller	ranges	than	Sphingids	
Species	with	narrow	ranges	oJen	
concentrated	in	biodiversity	hotspot	
Median	Geographic	range		area	(km2)	
1.0x105	
8.4x103	 11x106	
Saturniids	 	 	 	Sphingids	
2441	BINS	 	 	 	1245	BINS		
Excluding	singletons	and	doubletons	
	
Legend
SatRanges_Neotrop_PointToRas
8,439-1,000,000
1,000,000.001-3,053,878.833
3,053,878.834-3,573,047.403
87x106
UNDERSTANDING
PATTERNS
EvoluPonary	dimension	
AIM: First and most complete phylogeny for a group of insects
Evolutionary dimension
UNDERSTANDING PATTERNS
Phylogeny at genus level
Combination of: (1) 2000 sp./1380 UCE loci dataset with (2) 5000+sp./DNA barcode dataset
Role of traits
… on diversification
dynamics
… on diversity patterns (richness, ranges, etc.)
UNDERSTANDING PATTERNS
Taxonomy	
Phylogeny	
Biogeography	
Life-histories	&	traits	
Take home messages
Fill	up	knowledge	gaps	at	global	scale	for	a	group	of	
insects	
  Increasing	basic	knowledge	about	insect	diversity	in	
space	and	Pme		
  Understand,	predict	species	responses	to	
environmental	changes	
  Framework,	workflow	and	tools	made	available	for	
other	groups	
  Comparison	to	other	groups	(vertebrates,	plants,	
etc.)	
  ConservaPon	biology:	
  highlight	areas	/	taxa	
  evaluate	current	conservaPon	framework	
  design	new	conservaPon	strategies	
Perspectives
ACKNOWLEDGEMENTS
All students (undergrads, master) and all
contributors to the barcoding campaigns…
Pierre Arnal
Sujeevan
Ratnasingham
Thibaud Decaëns
Jean-Yves
Rasplus
Jérôme
Murienne Jan Beck
Sébastien
Lavergne
Ian
Kitching
Stuart
Pimm
Carlos
Lopez-Vaamonde
FUNDING AGENCIES
Paul
Hebert
Astrid
Cruaud
Hélène
Morlon
Rodolphe
Rougerie
You for your attention!!

More Related Content

What's hot

Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...
Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...
Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...mgray11
 
Host community structure determines pathogen outbreak potential
Host community structure determines pathogen outbreak potentialHost community structure determines pathogen outbreak potential
Host community structure determines pathogen outbreak potentialILRI
 
Phyllostomidae and the evolution of diet
Phyllostomidae and the evolution of dietPhyllostomidae and the evolution of diet
Phyllostomidae and the evolution of dietYann Gager
 
Transmission of ranavirus between ectothermic vertebrate hosts
Transmission of ranavirus between ectothermic vertebrate hostsTransmission of ranavirus between ectothermic vertebrate hosts
Transmission of ranavirus between ectothermic vertebrate hostsmgray11
 
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...The first in-depth insight into the genetic diversity of a buffelgrass (Cench...
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...ILRI
 
Alexander et al 2016 Lizard Paper
Alexander et al 2016 Lizard PaperAlexander et al 2016 Lizard Paper
Alexander et al 2016 Lizard PaperStephanie Tang
 
Sagebrush Poster Final Draft
Sagebrush Poster Final DraftSagebrush Poster Final Draft
Sagebrush Poster Final DraftMark Mendoza
 
Paper wasps are darker at high elevation
Paper wasps are darker at high elevationPaper wasps are darker at high elevation
Paper wasps are darker at high elevationAndrRodrigues354
 
Identification of SNP markers for resistance to Salmonella and IBDV in indige...
Identification of SNP markers for resistance to Salmonella and IBDV in indige...Identification of SNP markers for resistance to Salmonella and IBDV in indige...
Identification of SNP markers for resistance to Salmonella and IBDV in indige...ILRI
 
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, Kenya
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, KenyaInterepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, Kenya
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, KenyaMark Nanyingi
 
Do geckos rest with their food
Do geckos rest with their foodDo geckos rest with their food
Do geckos rest with their foodBen Owen
 
Can patterns of ranavirus emergence be used to assess conservation threat?
Can patterns of ranavirus emergence be used to assess conservation threat?Can patterns of ranavirus emergence be used to assess conservation threat?
Can patterns of ranavirus emergence be used to assess conservation threat?mgray11
 
Using Supercomputers and Supernetworks to Explore the Ocean of Life
Using Supercomputers and Supernetworks to Explore the Ocean of LifeUsing Supercomputers and Supernetworks to Explore the Ocean of Life
Using Supercomputers and Supernetworks to Explore the Ocean of LifeLarry Smarr
 
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmeiUnlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmeimillerjeremya
 
Sero-epidemiological investigation of foot and mouth disease in cattle at the...
Sero-epidemiological investigation of foot and mouth disease in cattle at the...Sero-epidemiological investigation of foot and mouth disease in cattle at the...
Sero-epidemiological investigation of foot and mouth disease in cattle at the...ILRI
 
Ecology and Epidemiology of Ranaviruses
Ecology and Epidemiology of RanavirusesEcology and Epidemiology of Ranaviruses
Ecology and Epidemiology of Ranavirusesmgray11
 
Discussion of "Caterpillars lack a resident gut microbiome"
Discussion of "Caterpillars lack a resident gut microbiome"Discussion of "Caterpillars lack a resident gut microbiome"
Discussion of "Caterpillars lack a resident gut microbiome"Jonathan Eisen
 
Exploratory cox1 analyses unveil operational biases and blurry species bounda...
Exploratory cox1 analyses unveil operational biases and blurry species bounda...Exploratory cox1 analyses unveil operational biases and blurry species bounda...
Exploratory cox1 analyses unveil operational biases and blurry species bounda...Leonardo Gonçalves
 
Phytothreats: WP4 overview
Phytothreats: WP4 overviewPhytothreats: WP4 overview
Phytothreats: WP4 overviewForest Research
 

What's hot (20)

Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...
Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...
Ranavirus: an emerging pathogen in amphibian, fish and reptile populations in...
 
Host community structure determines pathogen outbreak potential
Host community structure determines pathogen outbreak potentialHost community structure determines pathogen outbreak potential
Host community structure determines pathogen outbreak potential
 
Phyllostomidae and the evolution of diet
Phyllostomidae and the evolution of dietPhyllostomidae and the evolution of diet
Phyllostomidae and the evolution of diet
 
Transmission of ranavirus between ectothermic vertebrate hosts
Transmission of ranavirus between ectothermic vertebrate hostsTransmission of ranavirus between ectothermic vertebrate hosts
Transmission of ranavirus between ectothermic vertebrate hosts
 
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...The first in-depth insight into the genetic diversity of a buffelgrass (Cench...
The first in-depth insight into the genetic diversity of a buffelgrass (Cench...
 
Alexander et al 2016 Lizard Paper
Alexander et al 2016 Lizard PaperAlexander et al 2016 Lizard Paper
Alexander et al 2016 Lizard Paper
 
Sagebrush Poster Final Draft
Sagebrush Poster Final DraftSagebrush Poster Final Draft
Sagebrush Poster Final Draft
 
Paper wasps are darker at high elevation
Paper wasps are darker at high elevationPaper wasps are darker at high elevation
Paper wasps are darker at high elevation
 
Identification of SNP markers for resistance to Salmonella and IBDV in indige...
Identification of SNP markers for resistance to Salmonella and IBDV in indige...Identification of SNP markers for resistance to Salmonella and IBDV in indige...
Identification of SNP markers for resistance to Salmonella and IBDV in indige...
 
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, Kenya
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, KenyaInterepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, Kenya
Interepidemic Seroepidemiological Survey of Rift Valley Fever in Garissa, Kenya
 
Do geckos rest with their food
Do geckos rest with their foodDo geckos rest with their food
Do geckos rest with their food
 
Can patterns of ranavirus emergence be used to assess conservation threat?
Can patterns of ranavirus emergence be used to assess conservation threat?Can patterns of ranavirus emergence be used to assess conservation threat?
Can patterns of ranavirus emergence be used to assess conservation threat?
 
Barn Owl Poster
Barn Owl PosterBarn Owl Poster
Barn Owl Poster
 
Using Supercomputers and Supernetworks to Explore the Ocean of Life
Using Supercomputers and Supernetworks to Explore the Ocean of LifeUsing Supercomputers and Supernetworks to Explore the Ocean of Life
Using Supercomputers and Supernetworks to Explore the Ocean of Life
 
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmeiUnlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
Unlocking the Legacy: The untapped value of data in taxonomic literature #pibmei
 
Sero-epidemiological investigation of foot and mouth disease in cattle at the...
Sero-epidemiological investigation of foot and mouth disease in cattle at the...Sero-epidemiological investigation of foot and mouth disease in cattle at the...
Sero-epidemiological investigation of foot and mouth disease in cattle at the...
 
Ecology and Epidemiology of Ranaviruses
Ecology and Epidemiology of RanavirusesEcology and Epidemiology of Ranaviruses
Ecology and Epidemiology of Ranaviruses
 
Discussion of "Caterpillars lack a resident gut microbiome"
Discussion of "Caterpillars lack a resident gut microbiome"Discussion of "Caterpillars lack a resident gut microbiome"
Discussion of "Caterpillars lack a resident gut microbiome"
 
Exploratory cox1 analyses unveil operational biases and blurry species bounda...
Exploratory cox1 analyses unveil operational biases and blurry species bounda...Exploratory cox1 analyses unveil operational biases and blurry species bounda...
Exploratory cox1 analyses unveil operational biases and blurry species bounda...
 
Phytothreats: WP4 overview
Phytothreats: WP4 overviewPhytothreats: WP4 overview
Phytothreats: WP4 overview
 

Similar to CESAB-ACTIAS-sfe2018

Global patterns of insect diiversity, distribution and evolutionary distinctness
Global patterns of insect diiversity, distribution and evolutionary distinctnessGlobal patterns of insect diiversity, distribution and evolutionary distinctness
Global patterns of insect diiversity, distribution and evolutionary distinctnessAlison Specht
 
PENSOFT ARTICLE COLLECTION ABOUT MYANMAR
PENSOFT ARTICLE COLLECTION ABOUT MYANMARPENSOFT ARTICLE COLLECTION ABOUT MYANMAR
PENSOFT ARTICLE COLLECTION ABOUT MYANMARMYO AUNG Myanmar
 
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Island
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean IslandA Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Island
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Islandmillerjeremya
 
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdf
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdfPaper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdf
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdfOanhTrng13
 
Rapid Impact Assessment of Climatic and Physio-graphic Changes on Flagship G...
Rapid Impact Assessment of Climatic and Physio-graphic Changes  on Flagship G...Rapid Impact Assessment of Climatic and Physio-graphic Changes  on Flagship G...
Rapid Impact Assessment of Climatic and Physio-graphic Changes on Flagship G...Arvinder Singh
 
Hidden generic diversity in neotropical birds molecular and anatomical data s...
Hidden generic diversity in neotropical birds molecular and anatomical data s...Hidden generic diversity in neotropical birds molecular and anatomical data s...
Hidden generic diversity in neotropical birds molecular and anatomical data s...herculanoalvarenga
 
Molecular Systematics and Biodiversity
Molecular Systematics and BiodiversityMolecular Systematics and Biodiversity
Molecular Systematics and BiodiversitySarwar A.D
 
A timescale for the evolution of lice
A timescale for the evolution of liceA timescale for the evolution of lice
A timescale for the evolution of liceVince Smith
 
Bioinformatica 24-11-2011-t6-phylogenetics
Bioinformatica 24-11-2011-t6-phylogeneticsBioinformatica 24-11-2011-t6-phylogenetics
Bioinformatica 24-11-2011-t6-phylogeneticsProf. Wim Van Criekinge
 
Horsley et al_Acta Chiro_2015
Horsley et al_Acta Chiro_2015Horsley et al_Acta Chiro_2015
Horsley et al_Acta Chiro_2015Tom Horsley
 
How the Encyclopedia of Life is wrangling organismal attribute data
How the Encyclopedia of Life is wrangling organismal attribute dataHow the Encyclopedia of Life is wrangling organismal attribute data
How the Encyclopedia of Life is wrangling organismal attribute dataCyndy Parr
 
Intro to aDNA and bioarchaeology
Intro to aDNA and bioarchaeologyIntro to aDNA and bioarchaeology
Intro to aDNA and bioarchaeologykwopschall
 
Comparing the Amount and Quality of Information from Different Sequencing Str...
Comparing the Amount and Quality of Information from Different Sequencing Str...Comparing the Amount and Quality of Information from Different Sequencing Str...
Comparing the Amount and Quality of Information from Different Sequencing Str...jembrown
 
Reef fish, newcomers to macro-ecology
Reef fish, newcomers to macro-ecologyReef fish, newcomers to macro-ecology
Reef fish, newcomers to macro-ecologyAlison Specht
 
Gutell 105.zoologica.scripta.2009.38.0043
Gutell 105.zoologica.scripta.2009.38.0043Gutell 105.zoologica.scripta.2009.38.0043
Gutell 105.zoologica.scripta.2009.38.0043Robin Gutell
 
Jonathan D.majer, Ants pass the bioindicator score board
Jonathan D.majer, Ants pass the bioindicator score boardJonathan D.majer, Ants pass the bioindicator score board
Jonathan D.majer, Ants pass the bioindicator score boardAndy Fernando Siahaan
 

Similar to CESAB-ACTIAS-sfe2018 (20)

2000 JME (51)278-285
2000 JME (51)278-2852000 JME (51)278-285
2000 JME (51)278-285
 
Global patterns of insect diiversity, distribution and evolutionary distinctness
Global patterns of insect diiversity, distribution and evolutionary distinctnessGlobal patterns of insect diiversity, distribution and evolutionary distinctness
Global patterns of insect diiversity, distribution and evolutionary distinctness
 
PENSOFT ARTICLE COLLECTION ABOUT MYANMAR
PENSOFT ARTICLE COLLECTION ABOUT MYANMARPENSOFT ARTICLE COLLECTION ABOUT MYANMAR
PENSOFT ARTICLE COLLECTION ABOUT MYANMAR
 
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Island
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean IslandA Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Island
A Multi-Taxon Cyberdiversity Inventory of a Small Caribbean Island
 
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdf
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdfPaper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdf
Paper to Upload, MOLECULAR PHYLOGENY OF CATFISHES.pdf
 
Rapid Impact Assessment of Climatic and Physio-graphic Changes on Flagship G...
Rapid Impact Assessment of Climatic and Physio-graphic Changes  on Flagship G...Rapid Impact Assessment of Climatic and Physio-graphic Changes  on Flagship G...
Rapid Impact Assessment of Climatic and Physio-graphic Changes on Flagship G...
 
Hidden generic diversity in neotropical birds molecular and anatomical data s...
Hidden generic diversity in neotropical birds molecular and anatomical data s...Hidden generic diversity in neotropical birds molecular and anatomical data s...
Hidden generic diversity in neotropical birds molecular and anatomical data s...
 
Molecular Systematics and Biodiversity
Molecular Systematics and BiodiversityMolecular Systematics and Biodiversity
Molecular Systematics and Biodiversity
 
A timescale for the evolution of lice
A timescale for the evolution of liceA timescale for the evolution of lice
A timescale for the evolution of lice
 
Bioinformatica 24-11-2011-t6-phylogenetics
Bioinformatica 24-11-2011-t6-phylogeneticsBioinformatica 24-11-2011-t6-phylogenetics
Bioinformatica 24-11-2011-t6-phylogenetics
 
Horsley et al_Acta Chiro_2015
Horsley et al_Acta Chiro_2015Horsley et al_Acta Chiro_2015
Horsley et al_Acta Chiro_2015
 
How the Encyclopedia of Life is wrangling organismal attribute data
How the Encyclopedia of Life is wrangling organismal attribute dataHow the Encyclopedia of Life is wrangling organismal attribute data
How the Encyclopedia of Life is wrangling organismal attribute data
 
Stoeckle - All Birds Barcoding Initiative
Stoeckle - All Birds Barcoding Initiative Stoeckle - All Birds Barcoding Initiative
Stoeckle - All Birds Barcoding Initiative
 
Intro to aDNA and bioarchaeology
Intro to aDNA and bioarchaeologyIntro to aDNA and bioarchaeology
Intro to aDNA and bioarchaeology
 
Comparing the Amount and Quality of Information from Different Sequencing Str...
Comparing the Amount and Quality of Information from Different Sequencing Str...Comparing the Amount and Quality of Information from Different Sequencing Str...
Comparing the Amount and Quality of Information from Different Sequencing Str...
 
Reef fish, newcomers to macro-ecology
Reef fish, newcomers to macro-ecologyReef fish, newcomers to macro-ecology
Reef fish, newcomers to macro-ecology
 
Gutell 105.zoologica.scripta.2009.38.0043
Gutell 105.zoologica.scripta.2009.38.0043Gutell 105.zoologica.scripta.2009.38.0043
Gutell 105.zoologica.scripta.2009.38.0043
 
Jonathan D.majer, Ants pass the bioindicator score board
Jonathan D.majer, Ants pass the bioindicator score boardJonathan D.majer, Ants pass the bioindicator score board
Jonathan D.majer, Ants pass the bioindicator score board
 
Poster_Salomon&Sklenar
Poster_Salomon&SklenarPoster_Salomon&Sklenar
Poster_Salomon&Sklenar
 
Z03636p438p666
Z03636p438p666Z03636p438p666
Z03636p438p666
 

Recently uploaded

Horizon Net Zero Dawn – keynote slides by Ben Abraham
Horizon Net Zero Dawn – keynote slides by Ben AbrahamHorizon Net Zero Dawn – keynote slides by Ben Abraham
Horizon Net Zero Dawn – keynote slides by Ben Abrahamssuserbb03ff
 
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...ranjana rawat
 
DENR EPR Law Compliance Updates April 2024
DENR EPR Law Compliance Updates April 2024DENR EPR Law Compliance Updates April 2024
DENR EPR Law Compliance Updates April 2024itadmin50
 
VIP Kolkata Call Girl Kalighat 👉 8250192130 Available With Room
VIP Kolkata Call Girl Kalighat 👉 8250192130  Available With RoomVIP Kolkata Call Girl Kalighat 👉 8250192130  Available With Room
VIP Kolkata Call Girl Kalighat 👉 8250192130 Available With Roomdivyansh0kumar0
 
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Serviceranjana rawat
 
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...Amil baba
 
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...ranjana rawat
 
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130Suhani Kapoor
 
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service Gorakhpur
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service GorakhpurVIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service Gorakhpur
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service GorakhpurSuhani Kapoor
 
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130Suhani Kapoor
 
Contact Number Call Girls Service In Goa 9316020077 Goa Call Girls Service
Contact Number Call Girls Service In Goa  9316020077 Goa  Call Girls ServiceContact Number Call Girls Service In Goa  9316020077 Goa  Call Girls Service
Contact Number Call Girls Service In Goa 9316020077 Goa Call Girls Servicesexy call girls service in goa
 
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...Call Girls in Nagpur High Profile
 

Recently uploaded (20)

Horizon Net Zero Dawn – keynote slides by Ben Abraham
Horizon Net Zero Dawn – keynote slides by Ben AbrahamHorizon Net Zero Dawn – keynote slides by Ben Abraham
Horizon Net Zero Dawn – keynote slides by Ben Abraham
 
Green Banking
Green Banking Green Banking
Green Banking
 
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...
(AISHA) Wagholi Call Girls Just Call 7001035870 [ Cash on Delivery ] Pune Esc...
 
Escort Service Call Girls In Shakti Nagar, 99530°56974 Delhi NCR
Escort Service Call Girls In Shakti Nagar, 99530°56974 Delhi NCREscort Service Call Girls In Shakti Nagar, 99530°56974 Delhi NCR
Escort Service Call Girls In Shakti Nagar, 99530°56974 Delhi NCR
 
DENR EPR Law Compliance Updates April 2024
DENR EPR Law Compliance Updates April 2024DENR EPR Law Compliance Updates April 2024
DENR EPR Law Compliance Updates April 2024
 
VIP Kolkata Call Girl Kalighat 👉 8250192130 Available With Room
VIP Kolkata Call Girl Kalighat 👉 8250192130  Available With RoomVIP Kolkata Call Girl Kalighat 👉 8250192130  Available With Room
VIP Kolkata Call Girl Kalighat 👉 8250192130 Available With Room
 
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service
(ZARA) Call Girls Talegaon Dabhade ( 7001035870 ) HI-Fi Pune Escorts Service
 
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...
NO1 Verified kala jadu karne wale ka contact number kala jadu karne wale baba...
 
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...
The Most Attractive Pune Call Girls Shirwal 8250192130 Will You Miss This Cha...
 
E Waste Management
E Waste ManagementE Waste Management
E Waste Management
 
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130
VIP Call Girls Service Tolichowki Hyderabad Call +91-8250192130
 
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service Gorakhpur
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service GorakhpurVIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service Gorakhpur
VIP Call Girl Gorakhpur Aashi 8250192130 Independent Escort Service Gorakhpur
 
Call Girls In Pratap Nagar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
Call Girls In Pratap Nagar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCeCall Girls In Pratap Nagar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
Call Girls In Pratap Nagar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
 
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130
VIP Call Girls Service Chaitanyapuri Hyderabad Call +91-8250192130
 
Call Girls In Yamuna Vihar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
Call Girls In Yamuna Vihar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCeCall Girls In Yamuna Vihar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
Call Girls In Yamuna Vihar꧁❤ 🔝 9953056974🔝❤꧂ Escort ServiCe
 
Sustainable Packaging
Sustainable PackagingSustainable Packaging
Sustainable Packaging
 
Gandhi Nagar (Delhi) 9953330565 Escorts, Call Girls Services
Gandhi Nagar (Delhi) 9953330565 Escorts, Call Girls ServicesGandhi Nagar (Delhi) 9953330565 Escorts, Call Girls Services
Gandhi Nagar (Delhi) 9953330565 Escorts, Call Girls Services
 
Contact Number Call Girls Service In Goa 9316020077 Goa Call Girls Service
Contact Number Call Girls Service In Goa  9316020077 Goa  Call Girls ServiceContact Number Call Girls Service In Goa  9316020077 Goa  Call Girls Service
Contact Number Call Girls Service In Goa 9316020077 Goa Call Girls Service
 
Green Marketing
Green MarketingGreen Marketing
Green Marketing
 
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...
VVIP Pune Call Girls Koregaon Park (7001035870) Pune Escorts Nearby with Comp...
 

CESAB-ACTIAS-sfe2018

  • 1. Dealing with heterogeneous data to improve our knowledge of biodiversity dynamics and ecosystem function: perspectives from synthesis projects. Saturniid and sphingid moths as novel models for the study of insect diversity and macroecology Liliana Ballesteros-Mejia and the ACTIAS consortium
  • 2. 2 Conservation policies are largely derived from vertebrate and plant data Kreft & Jetz (2007). Global patterns and determinants of vasculat plant diversity. PNAS 104 Jenkins et al. (2013). Global patterns of terrestrial vertebrate diversity and conservation. PNAS 110 Introduction
  • 3. 3 Conservation policies are largely derived from vertebrate and plant data Jenkins et al. (2013). Global patterns of terrestrial vertebrate diversity and conservation. PNAS 110 Insects make up for ~ 50% of species worldwide and play important ecological role. Affected by climate change and habitat disturbance Introduction
  • 4. Introduction 4 Cardoso et al. (2011). Biol. Cons. 144 Beck et al. (2012). Ecography 35 There are important knowledge shortfalls that hinder our understanding of insect biodiversity •  Linnean shortfall (Number of sp) •  Wallacean shortfall (Distribution of sp) •  Darwinian shortfall ( Evolution) •  Raunkiaerian shortfall (Sp traits and ecological functions) Hortal et al. (2015). Annu Rev. Ecol. Evol Syst. 46
  • 5. Misof et al. (2014). Science 346 Condamine et al. (2012). Ecology letters 15 Taxonomy Phylogeny Biogeography How to address the shortfalls? Life history & traits
  • 7. 7 Ø  Intermediate species richness (ca. 5000 sp.) Ø  Global distribution Ø  Very popular among collectors, many records! Ø  Molecular phylogeny is well resolved at higher levels Ø  Thoroughly documented through DNA barcode libraries Saturniid & sphingids moths as new models
  • 8. Langia Ambulyx Hemaris Proserpinus Sphingidae §  4 sub-families §  14 tribes §  205 genera Macroglossinae (1200 sp) Sphinginae (400 sp) Langinae (1 sp) 1602 species & ssp Smerinthinae (600 sp) Ceratocampinae (250 sp) Copiopteryx Saturniidae 3454 species & ssp §  8 sub-families §  15 tribes §  180 genera Arsenurinae (90 sp) Cercophanina e (25 sp) Hemileucinae (1700 sp) Saturniinae (1500 sp) Agliinae (5 sp) Oxyteninae (70 sp) Salassinae (30 sp) Saturniid & sphingids moths as new models
  • 9. •  Most species do not feed when adults •  Relatively low flying capacities •  Short adult lifespan •  Mostly Generalist caterpillars •  Sexual dimorphism •  Wide spectrum in feeding habits •  High flying capacities •  Longer adult lifespan •  Mostly specialist caterpillars •  Low sexual dimorphism Saturniidae Sphingidae Saturniid & sphingids moths as new models
  • 10. Making sense of complex data!
  • 11. 11 Making sense of complex data ACTIAS database Data compilation (e.g. Lemaire collection, MNHN, trait annotation) Data aggregation (e.g. Ballesteros et al. 2016; GBIF) First time for insects
  • 12. Distribution records Saturniidae: 95 410 records (48 391 with barcodes) Sphingidae: 185 867 records (29 251 with barcodes) Taxonomy / checklist Kitching et al. (2018) BDJ 6: e22236 10 353 names listed for both families Sphingidae: 205 genera, 1602 sp. & ssp. (+250 sp. in past 10 years) Saturniidae: 180 genera, 3454 sp. & ssp. (+1500 sp. in past 10 years) Tackling Linnean & Wallacean shor8alls Making sense of complex data
  • 13. ACTIAS database ACTIAS_OTU Designing and implementation of a dedicated workflow for data curation Nomenclature and Geography Making sense of complex data Taxonomic Reconciliation Conceptual Workflow
  • 16. The most obvious question and yet the most elusive answer! Taxonomical descriptions are not as fashionable anymore (early 20th century). A combination of molecular information (i.e. DNA barcodes) and integrative taxonomy is changing lately the taxonomy of insects. It has also revealed many cryptic species (most of them in the tropics) Recent inflation in species number: Sat 1500sp ; Sph 250sp (many waiting to be described!) Great wealth of barcodes data after 10 years sampling ready to be used. Estimating species richness from barcodes Does it correlate with previously published estimates?
  • 17. Tropics Observed richness at 200km cell-size Saturniidae Sphingidae Number of records 93% (43333) 85% (22404) Number of BINS 96% (3995) 94% (1829) UNDERSTANDING PATTERNS BIN = Barcode Index Number, as proxy for species How many species are there in the tropics Sat (Obs) 257 1 Sph (Obs) 150 1 Using DNA BARCODES: Balance between more accurate account of species diversity vs more limited sample size (30%)
  • 18. UNDERSTANDING PATTERNS Cell size Saturniidae (# Cells) Sphingidae (# Cells) Tropics With data 25rec Tropics With data 25rec 200 1272 702 236 1272 679 147 Chao1 estimators at 200km cell-size Used as response variable Sat (Chao) 408 6 Sph (Chao) 174 4 From these results, we fit multivariate models to identify the environmental predictors of species richness Estimating species richness in the tropics
  • 19. SatChao(env) 484.4 9.6 4 9 484 332 Neotropics as the richest for the two families. Andean part in South America, Venezuelan Amazonia, Lowland of Peru. In the Afrotropics: East arc Mountains, Highlands of Cameroon, Forest areas of Guinea and Sierra Leone, Madagascar. In the Asian tropics: Indo-Burma Hotspot, Sumatra, Borneo, Papua and New Guinea. UNDERSTANDING PATTERNS Log10Schao N= 236 cells. (Pseudo-R 2 = 0.742) Tropics Log10Schao N= 147 cells. (Pseudo-R 2 = 0.45)
  • 20. UNDERSTANDING PATTERNS Macroecological analyses: distribuBon of species ranges Saturniids have smaller ranges than Sphingids Species with narrow ranges oJen concentrated in biodiversity hotspot Median Geographic range area (km2) 1.0x105 8.4x103 11x106 Saturniids Sphingids 2441 BINS 1245 BINS Excluding singletons and doubletons Legend SatRanges_Neotrop_PointToRas 8,439-1,000,000 1,000,000.001-3,053,878.833 3,053,878.834-3,573,047.403 87x106
  • 21. UNDERSTANDING PATTERNS EvoluPonary dimension AIM: First and most complete phylogeny for a group of insects Evolutionary dimension UNDERSTANDING PATTERNS Phylogeny at genus level Combination of: (1) 2000 sp./1380 UCE loci dataset with (2) 5000+sp./DNA barcode dataset
  • 22. Role of traits … on diversification dynamics … on diversity patterns (richness, ranges, etc.) UNDERSTANDING PATTERNS
  • 23. Taxonomy Phylogeny Biogeography Life-histories & traits Take home messages Fill up knowledge gaps at global scale for a group of insects   Increasing basic knowledge about insect diversity in space and Pme   Understand, predict species responses to environmental changes   Framework, workflow and tools made available for other groups   Comparison to other groups (vertebrates, plants, etc.)   ConservaPon biology:   highlight areas / taxa   evaluate current conservaPon framework   design new conservaPon strategies Perspectives
  • 24. ACKNOWLEDGEMENTS All students (undergrads, master) and all contributors to the barcoding campaigns… Pierre Arnal Sujeevan Ratnasingham Thibaud Decaëns Jean-Yves Rasplus Jérôme Murienne Jan Beck Sébastien Lavergne Ian Kitching Stuart Pimm Carlos Lopez-Vaamonde FUNDING AGENCIES Paul Hebert Astrid Cruaud Hélène Morlon Rodolphe Rougerie You for your attention!!